Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2516 ATGCCTTCTTCAAAGCATAGCAGTAGCAGCAGTAAGAAGCAATCATCAAAATCCAAATCAAGGTTACAATCGTCAATTCCAGATGCCGCCTCCACTCCACCACGCACCACCACCATTCAACTCGACTCTCTCCTCCAACATGCTTCTCGAATCTTCCCTTCTTTCATTTCACATTCAGCTCTCGTTGCTGAAATTACCGACGTTGAATCCGCCGATTCTCTTTCCAAAGGCGCCGCCAAAATTTGGCTCTCTGAATCTTCCATGGTTGCATCTTCTCTTGCTCCCGGTTCACTTGTCTCTGTTTCTATTCCTTCTTCAAGTAAAGGAATTGCGGAATCGCATAATTTTCCTCTTACTTCATTGACTAATGGATTGGAAACTTCTAAGACATTGGATGATGATGTTGCAGGAAATTACTTTGCTATTGCAACGGTTTTTCCTTCTAACAAGGTATTGAAGGATGGAGTGCGCCTCTCTTTGAATCTTTTCTTTGCCATGGGACGTCCTCCTTTAGGCACATGTGTGTTTGTTCACCCAGTACATAAACAATCCTTGATATATAATTGCAAAGAAATATATCTTCAGCTGGCTACTTGTAAGAGTGGAACACCATTAAAAGTTAATAATTCCCCCTCATTGGACTTGTCTAAGTCAAAATCTCGTGTCCAAACTGAGAATGATATTGTTGCATCTCCTAAAACACCTTCTTATGGATCAAGGTTTTCTAATGACAGTGTGTATTCTTCCCCTGTATATGAAGATTCAGCATCAAGTGTAACTGATAATAATGGTCAATCGGTGACTTCATTTGATGTTAGCAAGGCATTAGGAAATGAAAGTTCCAAAAAATTACTAGAAACATGCGCGACTGGATTGTTATACTCTCGTTGTTTATTGCTGGGGAATCTTGTCACTGTCCAAATGTTGTCTGAGTTTTTCATTTTCCGAGTGATGGACATTAAAAAGGTGTCAACTACCATATATGACTATTCATTGAATGGGAGCAGTAATTTAAATCTTAAGGATTCTGAAATGGCGGTAGAGAATGTGAATCTGGCTTTCACTGTCAATTGGGAAACAAAAGTATTTTTATCTTTGCCGTCTAATGTAGCATTTGAAGAGTCAATTCAAAGGGACTTATCGTGTCTGAAACTTGATAATATTTCTAAATTAGGTGGTCTATCTAAAGAAGAAATTCTTTTGAAGCGCATAATTTCTTTTTCATTGAATGATATTTTATCAAGATTTGGTCAGCAGAATACCAGAGGGGTCCTTCTTCATGGTCCACCTGGTACGGGAAAGACTTCCCTGGCTCAATTATGTGCCCATGATGCTGGGGTCAACTTTTTCTCAATAAACGGACCTGAAATTGTTACCGAGAATTATGGGGAAAGTGAGAAAGCATTGCAAGAAGTTTTTGATTCTGCCATTCAAGCTGCACCTGCCGTGTTATTTATTGATAAAATAGATGCAATTGCCCCTCCAAGGAAAGATGGGGGTGAAGAGCTATCTAAAAGATTGGTTGTAACCTTATTGGGTCTGATGGATGGAATTAGAAGAAATGAAGGGTTGGTTGTGATTGCTGCTACTAATAGGCTTGACCGTATTGATCCAGCTCTCAGACGACCTGGAAGATTTGACAAGGAAGTTGAAATTGGTGTGCCATCACAAGTGGAACGGGGAGATATCTTGCGCGCTATTCTCGGTGAAATAGATCACTCTCTTTCTGAGACACAAATTGAAGAGCTTGCCTCAATAACTCATGGATTTGTAGGTGCTGATTTAGTTGGCCTTCGCAACTGGGCAGCTTTAATTTGTCTACGACGTTATGCTGAACAGAAACTTAAGAAGACTTGCAATGCTAGTTCTGATGACATAACAAAGCAACCCACCCCATTGAAAAGTGCAACAAACTCGAAAGACCATTCAGATGAGACGCCTGATCATGGTGAAGAAGAGCATATTTTGAAAGTGACTTTTGAGGATTTTCAGAAGGCTAGGCCTGAAATAAGACCTAGTGCCATGAGAGAGGTGACCCTTGAGGTTCCAAAGGTTAATTGGGAAGATATCGGCGGCCAGAAGGAGGTCAAAAATCAATTGTTGGAAGCAGTAGTATGGCCCCAAAAGCACCGTGATGCATTCACCCGTATTGGGACTGATCCTCCAACAGCTGTATTAATGTTTGGACCTCCAGGTTGTAGCAAAACCCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGACTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGCGAGTCTGAGAAGGCCGTCAGATCATTGTTTGATAAAGCAAGGGCAAATGCCCCAGCAATTATATTTTTCGATGAAATTGACAGTCTTGCTATAACTCGTGGGAAAGATGGCGACGGTGTTTCAGTGTCTGATAGGGTCATGGCTCAACTTCTTGTTCAATTGGATGGTGTGCTTAAAAGAGTTGATGTTATTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGACCCTGCTCTTTTAAGACAAGGACGCTTTGACCGTCTTCTATATGTTGGACCTCCAAATGAGATAGACAGAGAAGAGATATTTAGCATTCATTTGCGCAAAACTCCATATGATTCTGATGTTAGCATGAAAGAACTGGCTCAACTGACAGATGGTTATACTGGGGCTGATATAGCACATATATGTCGACAAGCAGCTCTTGCAGCATTGGAGGAAAGCTTTGATGCTTCCGTTGTAACAATGAAGCACTTTAAGATGGCAATCAAACAGGTTCAGCCCTCAGAATTTCAGTCCTACCAAAAGCTGTCAGCAAAATTTCAAAGGGCCGTGTTCTCTGATGCGATATAA 2865 0.4129 MPSSKHSSSSSKKQSSKSKSRLQSSIPDAASTPPRTTTIQLDSLLQHASRIFPSFISHSALVAEITDVESADSLSKGAAKIWLSESSMVASSLAPGSLVSVSIPSSSKGIAESHNFPLTSLTNGLETSKTLDDDVAGNYFAIATVFPSNKVLKDGVRLSLNLFFAMGRPPLGTCVFVHPVHKQSLIYNCKEIYLQLATCKSGTPLKVNNSPSLDLSKSKSRVQTENDIVASPKTPSYGSRFSNDSVYSSPVYEDSASSVTDNNGQSVTSFDVSKALGNESSKKLLETCATGLLYSRCLLLGNLVTVQMLSEFFIFRVMDIKKVSTTIYDYSLNGSSNLNLKDSEMAVENVNLAFTVNWETKVFLSLPSNVAFEESIQRDLSCLKLDNISKLGGLSKEEILLKRIISFSLNDILSRFGQQNTRGVLLHGPPGTGKTSLAQLCAHDAGVNFFSINGPEIVTENYGESEKALQEVFDSAIQAAPAVLFIDKIDAIAPPRKDGGEELSKRLVVTLLGLMDGIRRNEGLVVIAATNRLDRIDPALRRPGRFDKEVEIGVPSQVERGDILRAILGEIDHSLSETQIEELASITHGFVGADLVGLRNWAALICLRRYAEQKLKKTCNASSDDITKQPTPLKSATNSKDHSDETPDHGEEEHILKVTFEDFQKARPEIRPSAMREVTLEVPKVNWEDIGGQKEVKNQLLEAVVWPQKHRDAFTRIGTDPPTAVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFDKARANAPAIIFFDEIDSLAITRGKDGDGVSVSDRVMAQLLVQLDGVLKRVDVIVIAATNRPDKIDPALLRQGRFDRLLYVGPPNEIDREEIFSIHLRKTPYDSDVSMKELAQLTDGYTGADIAHICRQAALAALEESFDASVVTMKHFKMAIKQVQPSEFQSYQKLSAKFQRAVFSDAI* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2516 954 MobiDBLite consensus disorder prediction 1 35 - -
Mtr7g2516 954 PANTHER AAA-FAMILY ATPASE 61 623 - -
Mtr7g2516 954 PANTHER AAA-FAMILY ATPASE 636 950 - -
Mtr7g2516 954 MobiDBLite consensus disorder prediction 618 653 - -
Mtr7g2516 954 MobiDBLite consensus disorder prediction 638 653 - -
Mtr7g2516 954 MobiDBLite consensus disorder prediction 622 637 - -
Mtr7g2516 954 ProSitePatterns AAA-protein family signature. 524 542 IPR003960 GO:0005524|GO:0016887
Mtr7g2516 954 Pfam ATPase family associated with various cellular activities (AAA) 725 856 IPR003959 GO:0005524|GO:0016887
Mtr7g2516 954 Pfam ATPase family associated with various cellular activities (AAA) 424 553 IPR003959 GO:0005524|GO:0016887
Mtr7g2516 954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 683 935 IPR027417 -
Mtr7g2516 954 ProSitePatterns AAA-protein family signature. 827 845 IPR003960 GO:0005524|GO:0016887
Mtr7g2516 954 Gene3D - 383 553 IPR027417 -
Mtr7g2516 954 PANTHER - 61 623 - -
Mtr7g2516 954 PANTHER - 636 950 - -
Mtr7g2516 954 CDD AAA 691 857 - -
Mtr7g2516 954 Gene3D - 555 672 - -
Mtr7g2516 954 CDD AAA 422 553 - -
Mtr7g2516 954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 670 IPR027417 -
Mtr7g2516 954 Pfam AAA+ lid domain 879 924 IPR041569 -
Mtr7g2516 954 Gene3D - 682 934 IPR027417 -
Mtr7g2516 954 Gene3D - 858 928 - -
Mtr7g2516 954 SMART AAA_5 721 859 IPR003593 -
Mtr7g2516 954 SMART AAA_5 420 556 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2516 Mtr-Chr7 41665133 41678233 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2516 11 952 Calmodulin-binding Proteins AT3G56690 51.812 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2516 - - cam:101494446 1365.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2516 7 41665133 41678233 Mtr7g2516 7 41665133 41678233 ECH