Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2512 ATGTGTGGAGAAACTGAAAGCTGCACCAGCAGCACCAACGGTCACCATAAAGCAGAGGATGTCGTCGGTGGCAACGCTAAAGCTATTCAAATCCTCAGAGAACTCATCACTTACCCTCGTCTCTTCACTTCTGAAGCTAAACAGCTTGGCCTTAAAGTTCTGTTTTTTCAAACTCTTTTACTTCTTTTAATTCATTTTGGATTTCTTACTTTTTATTTTTGGTTTTGCTTTCAGTTTCCAAGAGGGTTGTTGCTCTATGGTCCACCTGGTACTGGAAAGACCAGTTTGGTACGGGCAATTGTTGAGGAATGTGGGGCAAATTTGACAATCATCAGTCCAAACACTGTTAATAGTGCACTTGCTGGCGAAAGTGAGAGAAATCTGCGCGAGGCTTTTTCAGAGGCATCATCTCATGCAGCCTTGGGCAAGTCATCGGTTATATTTATAGATGAAATAGATGGACTTTGTCCTCGCCGAGATTCCATAAGAGAGCTAGATGTCCGAATTGCTTCCCAACTTTGTACTTTGATGGACTCAAACAAAGCAACCTCATCTAATCCAGGGGTAGTTGTGGTTGCATCAACTAACAGGGTAGATGCAATTGACCCTGCCCTAAGAAGGTATGGACGTTTTGATATTGAAACTGAAGTTACAGTCCCTAATGAAGAGGAACGCCTTCAAATTCTAGAGCTGTATACAAGGAAGATCCCTCGGGATTCACAAGACTTAGAATATGTTGCTGCATCATGCAACGGATATGTTGGAGCTGATTTGCGGGATTTGTGTCTTGAAGCAGTCAAATCTGCAATCGAAAGGTCTGACAATGCAAATAAGGATGTTAACGATTCCAGTTTAACAATGGAAGATTGGAAGAATGCAAGGTCACTTGTTCAACCAAGCATAACAAGAGGCATTACTGTGGAAATTCCCAAAGTGACGTGGAAAGATATTGGGGGATTGAAAGACGTGAAGACAAAGCTCGAGCAAGCTATTGAGTGGCCTATGAAGCATCCTGATGCATTTTCAAGATTGGGAATAACCCCTATCCGTGGAATTCTTCTCCATGGACCTCCAGGATGTTCCAAAACTACTCTTGCTAAAGCTGCTGCAAATGCTGCTAATGTTCCTTTCTTTTCCTTGAGTTGTGCAGAATTATTTTCCATGTATGTCGGAGATGGAGAAGGTTTGCTTCGTGAAATATTTCAAAAAGCGCGGCTGGCTGGGAAGAGCATCATATTTTTTGATGAAGCTGATATAGTAGCTGGCAAGCGGGGTGATAGTTCGAGCGGCGGTGCTGTAGTTGGAGAGAGGCTTTTATCCACTCTGCTTACTGAGATGGATGGCTTAGAAGAAGCTAAAGGAGTCCTTGTTTTGGCTGCTACAAATCGCCCTTACGCAATTGATGCTGCACTTATGCGTCCTGGACGATTTGACCTGATTTTGTATGTTCCGCCACCTGATTTGGAGGGTCGATTTGAGATACTTAAAGTACACACACGTGGGATGAACTTAGGGAGTGATGTTGATCTCAGAAAACTAGCAGAAGATACCGAGCTCTTCACAGGAGCTGAACTACAGGGATTATGTAAAGAAGTTGGAATAGTAGCTCTAAGGGAAAACATAGATGCTAGCGTTGTTTACGATCACCATTTCAAGACCGCAAAGAATTCTTTAAAACCAGCATTAACAGCAGAAGAAATTGTTTCATACTCGTCTTTTAAGAGGACCTCATCTCGAGCTTTGTCGAAGGAAATTGAATAA 1761 0.4265 MCGETESCTSSTNGHHKAEDVVGGNAKAIQILRELITYPRLFTSEAKQLGLKVLFFQTLLLLLIHFGFLTFYFWFCFQFPRGLLLYGPPGTGKTSLVRAIVEECGANLTIISPNTVNSALAGESERNLREAFSEASSHAALGKSSVIFIDEIDGLCPRRDSIRELDVRIASQLCTLMDSNKATSSNPGVVVVASTNRVDAIDPALRRYGRFDIETEVTVPNEEERLQILELYTRKIPRDSQDLEYVAASCNGYVGADLRDLCLEAVKSAIERSDNANKDVNDSSLTMEDWKNARSLVQPSITRGITVEIPKVTWKDIGGLKDVKTKLEQAIEWPMKHPDAFSRLGITPIRGILLHGPPGCSKTTLAKAAANAANVPFFSLSCAELFSMYVGDGEGLLREIFQKARLAGKSIIFFDEADIVAGKRGDSSSGGAVVGERLLSTLLTEMDGLEEAKGVLVLAATNRPYAIDAALMRPGRFDLILYVPPPDLEGRFEILKVHTRGMNLGSDVDLRKLAEDTELFTGAELQGLCKEVGIVALRENIDASVVYDHHFKTAKNSLKPALTAEEIVSYSSFKRTSSRALSKEIE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2512 586 Gene3D - 220 301 - -
Mtr7g2512 586 CDD AAA 348 485 - -
Mtr7g2512 586 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 25 558 - -
Mtr7g2512 586 ProSitePatterns AAA-protein family signature. 455 473 IPR003960 GO:0005524|GO:0016887
Mtr7g2512 586 Gene3D - 302 486 IPR027417 -
Mtr7g2512 586 Gene3D - 487 578 - -
Mtr7g2512 586 Pfam AAA+ lid domain 507 552 IPR041569 -
Mtr7g2512 586 Pfam AAA+ lid domain 242 290 IPR041569 -
Mtr7g2512 586 Pfam ATPase family associated with various cellular activities (AAA) 83 217 IPR003959 GO:0005524|GO:0016887
Mtr7g2512 586 Pfam ATPase family associated with various cellular activities (AAA) 352 484 IPR003959 GO:0005524|GO:0016887
Mtr7g2512 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 310 547 IPR027417 -
Mtr7g2512 586 CDD AAA 80 214 - -
Mtr7g2512 586 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 87 106 - -
Mtr7g2512 586 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 433 452 - -
Mtr7g2512 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 297 IPR027417 -
Mtr7g2512 586 Gene3D - 9 218 IPR027417 -
Mtr7g2512 586 SMART AAA_5 348 487 IPR003593 -
Mtr7g2512 586 SMART AAA_5 79 221 IPR003593 -
Mtr7g2512 586 PANTHER AAA-FAMILY ATPASE 25 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2512 Mtr-Chr7 41633723 41640653 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2512 284 579 Calmodulin-binding Proteins AT3G56690 45.270 2.29e-81 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2512 - - vra:106755317 770.77