Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2507 ATGTGTGGAGAGATTGAAAGCTGCAAGAGCAGCAGTTATGAGAAAGAGGATGAAGTGATTGTTGGCAATGGCAACGCCAAATCTATTCAAATGCTCAGAAATCTCATCATAAAGCCTCGTCTCTTCCCTAGTCGGGCAAATAGGCTCCCAAGATCTTTGTTGCTTTCTGGTCCACGTGGCATTGGAAAGACCAGTTTGGTACGAGCAATTGTTAAGGAGTGTGGAGCAAATTTGATAATTATCAGCCCGAACACTGTTCACACCGCACATGCTGGTGATTGTGAGAGAACCCTCTGTGAGGCTTTTTCAGAGGCATTATCTCTTGTAGCCTCGGGCAAGTCTTCGGTTATCTTTATTGATGACATGGATGTACTTTGTCCTCCCCGAGATTCCCAAAGAGATAAAGATTTCCGAATTGTTTCCCTACTTTGTACTTTGATGGACTCAAGCAAAGCAACCTCTTCTACTCCAGGGGTAGTTGTGGTTGCATCAACTAAAAGGGTGGACGCAATTGACCCTGCCCTAAGAAGGTATGGACATTTCGATATTGAAACTGAGGTTACAGTCCCAGATAAAAAGGAGCGCCTTGAAATTCTAGAGCTGTATACAAGGGAGACCCCTCAGAATTCATGCGACTTAGAATCTATTGCTGCATCATGCAATGGATATGTCGGATCTGATTTACGGGCTTTGTGTAATGAAGCTGTCAATTCCGCAGTTAGAAGGTCTTCAAATGCAAAGAAAGATGTTAATGACTTCAGTTTAACGATGGAAGATTGGAAGAATGCAAGGTCTCTTGTTGAACCAAGTATAACAAAAGGCGTTACTCTGGAAATTCCCAAAGTGACTTGGAAAGATATTGGGGGATTGAAAGACGTGAAGAAAGAGCTAGAGAAAGCTGTTGAGTGGCCTATGAAGTATCCTGCTTCGTTTTCGAGATTGGGAATAAACCCTATTCGTGGAATTCTTCTCCACGGGCCTCCAGGATGTTCCAAAACTACTCTTGCTAAAGCTATTGCAAATGCTGCTAATGTTCCTTTCATTTCCTTGAGTTGTACAGAAATGATTTCAAAGTTTGTCGGACAAGGAGAAGGTTATCTTCGTGAAATGTTTCGCAAAGCACGGCTTGCCGGAAAAAGTATAATATTTTTTGATGAAGTTGATGCAGTAGCTGGGAAACGGGGTCATAGTTCGAGCGGTAATTCCGTAGCTGAAGAGAGGGTTTTATCCACTCTGCTAACTGAAATGGATGGTTTAGAAGAAGCCAAAGGAGTTCTTGTTTTGGCGGCTACAAATCGCCGCGAAGCTATTGATGATGCACTTTTGCGTCCTGGACGACTTGATCTGAAATTGTATGTGCCACCACCTGATTTGGAGGGTCGATTTGAGATACTTAAAGTATACACACGTAAGATGAAATTAGGGAGTGATGTTGATCTTAGAAGACTAGCAGAAGATACCGAGCGTTTCACAGGTGCCGAACTAGAGGGATTATGTAAGGAAGTTGGAGTAGAAGCTATAAGAGAAGCTATAAGAGAAAACAAGCAAGCTAGTGTTATTTATGGCCGCCATTTTCAGATTGTGAAGAATGCTTTAAAACCAGCATTGGCAGCAGAAAGAAAGAGCTGGGTGTTTCCTTTGTCTTTGGCTGAAAACAATGTAGTCAGTTATATTTTACTTGCCACTGCAGTAATGTTTTTTATTTATTTATTTATTTATTTATTGAAGCTAGTGCAGCACTGCTAA 1746 0.4181 MCGEIESCKSSSYEKEDEVIVGNGNAKSIQMLRNLIIKPRLFPSRANRLPRSLLLSGPRGIGKTSLVRAIVKECGANLIIISPNTVHTAHAGDCERTLCEAFSEALSLVASGKSSVIFIDDMDVLCPPRDSQRDKDFRIVSLLCTLMDSSKATSSTPGVVVVASTKRVDAIDPALRRYGHFDIETEVTVPDKKERLEILELYTRETPQNSCDLESIAASCNGYVGSDLRALCNEAVNSAVRRSSNAKKDVNDFSLTMEDWKNARSLVEPSITKGVTLEIPKVTWKDIGGLKDVKKELEKAVEWPMKYPASFSRLGINPIRGILLHGPPGCSKTTLAKAIANAANVPFISLSCTEMISKFVGQGEGYLREMFRKARLAGKSIIFFDEVDAVAGKRGHSSSGNSVAEERVLSTLLTEMDGLEEAKGVLVLAATNRREAIDDALLRPGRLDLKLYVPPPDLEGRFEILKVYTRKMKLGSDVDLRRLAEDTERFTGAELEGLCKEVGVEAIREAIRENKQASVIYGRHFQIVKNALKPALAAERKSWVFPLSLAENNVVSYILLATAVMFFIYLFIYLLKLVQHC* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2507 581 CDD AAA 24 184 - -
Mtr7g2507 581 Gene3D - 272 456 IPR027417 -
Mtr7g2507 581 Pfam ATPase family associated with various cellular activities (AAA) 53 187 IPR003959 GO:0005524|GO:0016887
Mtr7g2507 581 Pfam ATPase family associated with various cellular activities (AAA) 322 454 IPR003959 GO:0005524|GO:0016887
Mtr7g2507 581 ProSitePatterns AAA-protein family signature. 425 443 IPR003960 GO:0005524|GO:0016887
Mtr7g2507 581 Gene3D - 16 185 IPR027417 -
Mtr7g2507 581 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 280 513 IPR027417 -
Mtr7g2507 581 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 272 IPR027417 -
Mtr7g2507 581 PANTHER AAA-FAMILY ATPASE 25 531 - -
Mtr7g2507 581 SMART AAA_5 318 457 IPR003593 -
Mtr7g2507 581 SMART AAA_5 49 191 IPR003593 -
Mtr7g2507 581 Pfam AAA+ lid domain 477 517 IPR041569 -
Mtr7g2507 581 Pfam AAA+ lid domain 212 253 IPR041569 -
Mtr7g2507 581 Gene3D - 457 526 - -
Mtr7g2507 581 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 25 531 - -
Mtr7g2507 581 Coils Coil 574 581 - -
Mtr7g2507 581 Gene3D - 190 271 - -
Mtr7g2507 581 CDD AAA 317 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2507 Mtr-Chr7 41575608 41580473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2507 247 534 Calmodulin-binding Proteins AT3G56690 44.097 3.03e-75 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2507 - - gmx:100814288 671.003