Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2506 ATGCCTTCTTTGAGTACAAATCATAGTAGCAGCAACAAGAAGCAATTAAGTTTATCATCATCGTCGTCAATTCCCAACGATGCCGCCGCCACTCCACCATGCACCACGGCCGCGGAACCACAACATTTCGTCTCTCTCTGCCAAGAAGCTTCTCGAATCTTCCCTTCCTTCATTTCACAATCTGCTTTCGTCGTCGAAATCAGCGATATTGAATCCACCGACTCTCTTTCCAAAGGCACCGCCAAAATTTGGCTTTCTGAGTCTTCTATGATTGCTTCTTCTCTCGCTCCGGGTTCACTTGTCTCTGTTTCTATTCCTTCTTCAAGTAAAGGGATTGCGGAATCGCATAATTTTCCTCTCACTTCATTGACTGCTGAGTGTGTCAAATGCTATGGATTGGAAACTTGTAAGGCATTGGGTGATGGTGCTGCAGGAAACTACTTTGCTATTGCGACGGTTTTTCCTGCCAAGAAGGTATTGAAGAATGGTGCACGTCTGTCTTCAATTCTTTCTTTTGCCATGGGTTGTCCTCCTTTCGGTACATGTGTGTTTGTTCACCCATTACAGAAACAATCCTTAGTATATAATTGCAAAGAATTATATCTTCAACTGGCTTCTTGTAAGAGTGTACAAACATTGAAAGTTAATAATTTCCCCTCGTTGGACTTGTCTAATTCAAAATCGTGTGCCCAATCAGAGAATGATATTGTTGCATCTCCTAAAACACCTTCTTATGCATCAAAGTTTTCTAATGACAGTTTGTATTCTAACCCCGTAATAGAAGATTTAGCATCAAGTGTAACCAATTACAATGGTCAATCGGTGGCTTCATTTGATGTTAGCAAGACATTAGCAAATGGAAATTCCAAAAAATTACTAGAAACATGTGCAACTTCATCGTTATACTCTCGTTGTTTATTGGTAAGGAATTTTGTTACTCTCCCAATGTTGTCTGAGTTTTTCATTTTCCAAGTGATGGACATTAAAAAGGTGTCAGCTACCATACCCTGTCCATTAAATGGGAGCAATAATTCAAATCTTGAGGATTCTGATACGGTGGAGAAAGAGAATGTGGCTTTCGCTGTCAATTGGGAAACAAAGGTATTTTTATATTTGCCATCAAATGCCGCATTTGAAGAGTCAACTCAAAGGGATTTATTGTGTCTGAAACTTGATAGCAGACATGATAATATTTCTAAATTAGGTGGTCTATCTAAAGAAGAAATGTTTTTAAAGGACTTAATTTTTTATTCAAAGAACGATATTTTATCAAGATTTTGTCAATATAATACCGGAGTCCTTCTTCATGGTCCACCTGGTACTGGAAAGACCTCCCTGGCTCGATTATGTGCTCATGATGCCGGGGTCAAATTTTTCTCTATTGGACCTAAAATTGTTACCCAATATGGGGAAAATGAGAGAGCATTGCATGAAGTTTTTGATTCCGCCCTTCAAGCTGCACCTGCTGTGATATTTATTGATGAAATACATGCAATTGCCCCTACAAGGAAAGATGGGGGTGAAGAGCTATCTAAAAGATTGGTTGTAACCTTATTGAGTCTGATGGATGGAATTAGAAGAAACGAAGGGTTACTTGTAATTGCTGCTACTAATAGGCTTGACCTTATTGATCCAGATCTCAGAAGACCTGGAAGATTTGACAAGGAAATTGAAATTGGTGTGCCATCAAAAGCGCAACGAGAAGATATTCTGCGCACTATTCTCTGTGAAATAGATCACTCTCTTTCTGAGACACAAATTGAAGAGCTTGCCTCAATAACTCATGGATTTGTAGGTGCTGATTTAGTTGGCCTTTGCGAATGGGCACATTTTCTTTGTCCACGACATTCAGAAAAGACGCCTAATAGCAGTGAAGAACATATTTTGAAAGTGAGTTATGAGGATTTTCAAAAGGCTAGGCTCGAAATAGGACCCAGTGCCATGAGAGAGGTGACCCTTGAGGTTCCAAAGGTTAAATGGGAAGATATTGGAGGCCAAAAGAAAGTCAAGAATCAGTTGTTGGAAGCACTAGTATGGCCTCAAAAGTACCAGGATGCATTTGCCACTATTGGGACTGATCCTCCAACAGGTATATTGATGTATGGGCCTCCAGGTTGTAGCAAAACCCTATTGGCTCGTGCTGTTGCTTCTGAAGCTGGATTGAACTTTCTAGCAGTCAAGGGTCCTGAAGTCTTTAGCAAATGGCTTGGAGAATCTGAGAAGAATGTCAAATCATTGTTTGATAAAGCAAGGGCCAATGCCCCATCAGTTATATTTTTCGATGAAATTGATAGTCTTGCTGTAACTCGTGGGAAAGATGGTGATGGTGTTTCAGTGTCCGATAGGGTCACGAATCAACTTCTTATTCAATTGGATGGTGTGCGTAAAAGAGTTGATGTTGCTGTCATAGCTGCTACAAATAGGCTAGAAAATATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGACCGTTTGCTATATGTCGGACCTCCAAATAAGATGGACAGAGAAGAGATTTTTAGAATTCATTTGTGCAGAACTCCACGTGATTCTGATGTTAGCATGAAAGAATTAGCTCAACTGACAAATGGTTATACTGGGGCTGATATATCACGTATATGTCAACAAGCAGCTTTTAAAGCATTGGAGGAAAACTTTGATGCTTCCGTTGTAACAATGAAGCACTTTAAGACGGCAATTGAACAAGTTCAGCCCACAGAAACTCAGTCCTATCAAAAGTTGTCAGCAAAATTTCAAAGGGCTGTGTTCTCCGATCATGGCCTTCCCAGAGCAAATGCTACCAGGCCTGCGGCACAAGGCCTCAAATTTTTTGGGGTCCTAATAATTTTTATTTTTATTTTTTGCTTTTTATATAAGGCCCAAAAACATTGA 2892 0.4004 MPSLSTNHSSSNKKQLSLSSSSSIPNDAAATPPCTTAAEPQHFVSLCQEASRIFPSFISQSAFVVEISDIESTDSLSKGTAKIWLSESSMIASSLAPGSLVSVSIPSSSKGIAESHNFPLTSLTAECVKCYGLETCKALGDGAAGNYFAIATVFPAKKVLKNGARLSSILSFAMGCPPFGTCVFVHPLQKQSLVYNCKELYLQLASCKSVQTLKVNNFPSLDLSNSKSCAQSENDIVASPKTPSYASKFSNDSLYSNPVIEDLASSVTNYNGQSVASFDVSKTLANGNSKKLLETCATSSLYSRCLLVRNFVTLPMLSEFFIFQVMDIKKVSATIPCPLNGSNNSNLEDSDTVEKENVAFAVNWETKVFLYLPSNAAFEESTQRDLLCLKLDSRHDNISKLGGLSKEEMFLKDLIFYSKNDILSRFCQYNTGVLLHGPPGTGKTSLARLCAHDAGVKFFSIGPKIVTQYGENERALHEVFDSALQAAPAVIFIDEIHAIAPTRKDGGEELSKRLVVTLLSLMDGIRRNEGLLVIAATNRLDLIDPDLRRPGRFDKEIEIGVPSKAQREDILRTILCEIDHSLSETQIEELASITHGFVGADLVGLCEWAHFLCPRHSEKTPNSSEEHILKVSYEDFQKARLEIGPSAMREVTLEVPKVKWEDIGGQKKVKNQLLEALVWPQKYQDAFATIGTDPPTGILMYGPPGCSKTLLARAVASEAGLNFLAVKGPEVFSKWLGESEKNVKSLFDKARANAPSVIFFDEIDSLAVTRGKDGDGVSVSDRVTNQLLIQLDGVRKRVDVAVIAATNRLENIDPALLRPGRFDRLLYVGPPNKMDREEIFRIHLCRTPRDSDVSMKELAQLTNGYTGADISRICQQAAFKALEENFDASVVTMKHFKTAIEQVQPTETQSYQKLSAKFQRAVFSDHGLPRANATRPAAQGLKFFGVLIIFIFIFCFLYKAQKH* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2506 963 MobiDBLite consensus disorder prediction 1 30 - -
Mtr7g2506 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 912 IPR027417 -
Mtr7g2506 963 PANTHER AAA-FAMILY ATPASE 624 928 - -
Mtr7g2506 963 PANTHER AAA-FAMILY ATPASE 62 610 - -
Mtr7g2506 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 425 639 IPR027417 -
Mtr7g2506 963 Gene3D - 562 642 - -
Mtr7g2506 963 Gene3D - 831 901 - -
Mtr7g2506 963 Pfam AAA+ lid domain 852 897 IPR041569 -
Mtr7g2506 963 Gene3D - 379 560 IPR027417 -
Mtr7g2506 963 ProSitePatterns AAA-protein family signature. 800 818 IPR003960 GO:0005524|GO:0016887
Mtr7g2506 963 SMART AAA_5 429 563 IPR003593 -
Mtr7g2506 963 SMART AAA_5 694 832 IPR003593 -
Mtr7g2506 963 CDD AAA 664 830 - -
Mtr7g2506 963 Pfam ATPase family associated with various cellular activities (AAA) 698 829 IPR003959 GO:0005524|GO:0016887
Mtr7g2506 963 Pfam ATPase family associated with various cellular activities (AAA) 433 560 IPR003959 GO:0005524|GO:0016887
Mtr7g2506 963 PANTHER - 62 610 - -
Mtr7g2506 963 PANTHER - 624 928 - -
Mtr7g2506 963 MobiDBLite consensus disorder prediction 1 34 - -
Mtr7g2506 963 CDD AAA 432 560 - -
Mtr7g2506 963 Gene3D - 655 909 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2506 Mtr-Chr7 41562503 41573567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2506 617 925 Calmodulin-binding Proteins AT3G56690 67.961 4.78e-142 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2506 - - mtr:MTR_7g088830 1844.32