Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2500 ATGGAAGGAGATAAATGTTCAAGTTTTTTTCAAAGATGCAAACCTTACATAGCTATGATTTCTCTACAATTTGGATTTGCTGGTATGAACATAATAACAAAGGTTTCACTCAACCGTGGAATGAGTCACTATGTTCTTGTTGTTTATAGACATGCTTTTGCTACTGCTGTTATTGCTCCATTTGCTATTGTTCTTGAAAGGAAGATAAGGCCAAGGATCACATTTCTTATGTTTATGCAAATGTTCGTCTTGGGACTTCTCGGGCCTGTGATTGATCAGAATCTATACTATGCTGGATTGAAATTCACTTCCCCAACCTACTCATGTGCTATTAGCAATATTCTACCAGCAATGACATTTGTCATGGCAGTTATTTTCAGGATGGAGAAATTGGACATGAGAAAATTAAGATGCCAAGTAAAGGTGATTGGAACTGTAATCACAGTTGCTGGGGCCATGTTGATGACATTATACAAAGGACAAGTTATTAATATATTGAGTTCTCAATACATGCATCATCCTAAAAATTATGAACCTGAAAACATTACTGATTCTGGTGAAAAAGATTGGGTTAAAGGTTCCATTTTGCTCATAATTGCTACTTTTGCTTGGGCTTCTTTCTTCATACTTCAGGCTGTGACATTAAGGAAATATTCAGCTCAACTCTCACTTACAGCAATAGTGTGTTCCTTGGGCACACTTCAATCAATTGCTGTGACTTTTGTTATGGAGCATAACCCAAATGCTTGGAGCATTGGTTGGGACATGAACCTATTAGCTGCAGCATATGCTGGTATAATATCATCAGGTCTTACCTACTATGTTCAAGGGATAGTCATGCAAAAGAAAGGGCCAGTTTTTGTCACTGCTTTCAGTCCTTTGATGATGATCATTGTAGCAATTATGGGCACTTTCATCCTTGCAGAAAAATTATATCTTGGAGGTGTTATTGGAGCAATTTTGATCGTAATAGGACTTTACTCAGTTCTATGGGGCAAAAGCAAAGAAAATAAAGAGATTGAAGAAGAGACAATAACTGAGGGAATGAAGTGTTGTGTAGAAAATGGAGTAATATTGGAAACAGTGATTGAAGGTGTTGAAGAAACAAATGATATTGAAATGCAAAAGGGTGAAGCTACTAAAGTTTTGAGGGTAGCAATTATTAGTGTTCCAAAAGTTTAA 1182 0.3646 MEGDKCSSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAIVLERKIRPRITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNILPAMTFVMAVIFRMEKLDMRKLRCQVKVIGTVITVAGAMLMTLYKGQVINILSSQYMHHPKNYEPENITDSGEKDWVKGSILLIIATFAWASFFILQAVTLRKYSAQLSLTAIVCSLGTLQSIAVTFVMEHNPNAWSIGWDMNLLAAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYLGGVIGAILIVIGLYSVLWGKSKENKEIEEETITEGMKCCVENGVILETVIEGVEETNDIEMQKGEATKVLRVAIISVPKV* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2500 393 Pfam EamA-like transporter family 16 156 IPR000620 GO:0016020|GO:0016021
Mtr7g2500 393 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Mtr7g2500 393 PANTHER WAT1-RELATED PROTEIN 10 364 - -
Mtr7g2500 393 PANTHER WAT1-RELATED PROTEIN 10 364 IPR030184 GO:0016021|GO:0022857
Mtr7g2500 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Mtr7g2500 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2500 Mtr-Chr7 41465894 41468690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2500 2 391 Nodulin-like Gene Family AT5G07050 61.634 1.48e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2500 - - gmx:100811617 643.269