Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2499 ATGACACTCTCTCTACAAAATGAAGACTCAGAATTTGCACTCAAGCAAATTGGTAATGAAGGTCTCACTAAACAGATTCTTAGTAAAGGTCTCACTTGGCAAACTCCATTTTCTGGTGACCAAGTTGAAGTTCATTTCAGAGGACAAGTTGAAAATGGACCATCTCTAGAATCCAGTTATGATAAAGGGTCCTCCTTTCATTTCAAGTTAGGCCAAGGTGAAGTAATCAAAGGTTGGGATGAAGGAGTTGCTACGATGAAGAAAGGGGAGAGAGCAATCTTCAAGATACCATCCTCTTTAGCATATGGGGAAGTAGGTTCTCCACCGTTGATTCCTCCGAATGCAACTCTCATTTTTGAGATTGAAATGTTGTGTTGGAGTAGCATCAGAGACTTGACTGGCGATGGAGGAATCATGAAAAAGACAATACGAGAAGGAGAAGGATGGGCTACTCCAAAAGAGCTTGATGAAGTGCTAGGCTATCTTTGTCCAGCCATGAGCATTGCAGTAAAGACAATGAGAAAAGGCGAGGTGGCAGAGCTTAGTATGAAATTCTTTTATGGCCTTATTAGTCAAAATTCAAATAGAACCATTGAGCTTGATGATTTATCGGATTCTAATTTAATTAACATCAAACTTGAGCTGGTATCATGGAAAATTGTTACTGATATCACAGGAGATAAGAAAATACTGAAAAAGATTAATAAGGCCGGCGAGGGGTTTGATCGTCCTAATGAAGGATCGCATGTGAAAGTGATATATTTCTGTAAAGGAGAAGATGGTACAATTATTGAGAGGAAAGGGTCAAAGGAAGAACCTTTTGAGTTCACAACTCAAGAAGAACAAGTGCATGAGGGTCTAGAAAGAGCAATAATGACAATGAAAAAAGCCGAACAAGCTCTGGTGACTATCAATGCTGAATATTTTTTTGACCATAATAATTTGCAAGGAAACAAGGCCAATAATAAAATCCTTTACTATGAAGTTGAATTAGTTGATTTCACCAAGGAGAAGCCATTTTGGAAAATGGAAACTCAAGAGAAACTAGAAGCTTGTGAGCAGAAGAAGCATGATGGAAATCTTCTGTTCAAAGCTCAAAATTTTAGGCGCGCATCGAAGAAATATGAAAAGGCTGTAAAATACATTGAATTTGATCACACATTCAGCGACGGCGAGAAGGGTCATGCTAATACCTTGAGATTATCCTGTAATTTGAACAATGCTGCTTGTAAACTTAAATTGGAAGAGTACACTGAAGCTACTAGACTATGCACAAAGGTCCTAGAACAAGATCCCTTAAATGTGAAGGCTCTTTACAGAAGATGCCAAGCATACCTTAAAACATCAGACTTGGAGAAAGCTGAAGCTGACATTAAAAGAGCTTTGATTATTGATCCAAATAACAGAGAAATTAAACTTGAGTACAAAGAGCTCAAAATGAAGCAAAAGGAATACAATAAATATGAAGCTGACATCTTTAGCACAATGGTTTCAAGGATGAATTAG 1506 0.3778 MTLSLQNEDSEFALKQIGNEGLTKQILSKGLTWQTPFSGDQVEVHFRGQVENGPSLESSYDKGSSFHFKLGQGEVIKGWDEGVATMKKGERAIFKIPSSLAYGEVGSPPLIPPNATLIFEIEMLCWSSIRDLTGDGGIMKKTIREGEGWATPKELDEVLGYLCPAMSIAVKTMRKGEVAELSMKFFYGLISQNSNRTIELDDLSDSNLINIKLELVSWKIVTDITGDKKILKKINKAGEGFDRPNEGSHVKVIYFCKGEDGTIIERKGSKEEPFEFTTQEEQVHEGLERAIMTMKKAEQALVTINAEYFFDHNNLQGNKANNKILYYEVELVDFTKEKPFWKMETQEKLEACEQKKHDGNLLFKAQNFRRASKKYEKAVKYIEFDHTFSDGEKGHANTLRLSCNLNNAACKLKLEEYTEATRLCTKVLEQDPLNVKALYRRCQAYLKTSDLEKAEADIKRALIIDPNNREIKLEYKELKMKQKEYNKYEADIFSTMVSRMN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2499 501 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 327 501 - -
Mtr7g2499 501 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 159 - -
Mtr7g2499 501 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 217 323 - -
Mtr7g2499 501 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 161 221 - -
Mtr7g2499 501 SMART tpr_5 352 385 IPR019734 GO:0005515
Mtr7g2499 501 SMART tpr_5 435 468 IPR019734 GO:0005515
Mtr7g2499 501 SMART tpr_5 401 434 IPR019734 GO:0005515
Mtr7g2499 501 Coils Coil 287 307 - -
Mtr7g2499 501 ProSiteProfiles TPR repeat profile. 435 468 IPR019734 GO:0005515
Mtr7g2499 501 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 247 335 IPR001179 GO:0003755
Mtr7g2499 501 PANTHER PEPTIDYLPROLYL ISOMERASE 5 159 - -
Mtr7g2499 501 PANTHER PEPTIDYLPROLYL ISOMERASE 161 221 - -
Mtr7g2499 501 PANTHER PEPTIDYLPROLYL ISOMERASE 217 323 - -
Mtr7g2499 501 PANTHER PEPTIDYLPROLYL ISOMERASE 327 501 - -
Mtr7g2499 501 SUPERFAMILY FKBP-like 18 126 - -
Mtr7g2499 501 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 39 127 IPR001179 GO:0003755
Mtr7g2499 501 SUPERFAMILY FKBP-like 216 355 - -
Mtr7g2499 501 Pfam Tetratricopeptide repeat 435 468 IPR001440 GO:0005515
Mtr7g2499 501 Gene3D - 9 133 IPR046357 GO:0003755
Mtr7g2499 501 Gene3D - 220 337 IPR046357 GO:0003755
Mtr7g2499 501 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 36 124 IPR001179 GO:0003755
Mtr7g2499 501 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 243 332 IPR001179 GO:0003755
Mtr7g2499 501 SUPERFAMILY TPR-like 343 496 IPR011990 GO:0005515
Mtr7g2499 501 SUPERFAMILY FKBP-like 132 189 - -
Mtr7g2499 501 Coils Coil 471 491 - -
Mtr7g2499 501 Gene3D Tetratricopeptide repeat domain 338 495 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2499 Mtr-Chr7 41457430 41461247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2499 16 500 Calmodulin-binding Proteins AT5G48570 51.644 3.05e-179 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2499 - - gmx:100785412 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2499 7 41457430 41461247 Mtr7g2499 7 41457430 41461247 ECH