Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2496 ATGTGCAACAAGGGGAAGGAGAAGGTGAATGAAGAATCAATAGCCAATTTGAAGATGATGGAAAATCATAATAATGAGAACAAGAGAAAGGCAATCGTGTTGGAAGAATCCTATGTTGAAACTCAGAATTCGAGGACTCCCCAAAAAGATGTTGTTGAAGAAGAATCAACTGATTCTTCCAAAGAAATTTCTCCATTTCTTCGTTTTGGATTCATTGTTGATCACAGGAAAGGAATTCAAAAGGCTTACTCGTGCAAATTTTGTGGCAGAAAGTTCACTAGTCCACGTGCATTAGGTGGTCATCAAAATTCTCACAAATTAGAGAGAAGTCTCAAAAAAAGGATCCAAACTTTTAACAATGCTTGGATAAATTACTCAAATGGTGATCAAGGGATAAGTCTAAACACCATCTCTCCATTCCATATGGGGTGTGGATATCAATATTATGGATTTAACAATATGATTCAGCATGCAGGGTCATCAAACTTTTATGCAGGGAATTTGTATGGTGCATTGCAGCATATTCCAGAGATAGATGAAGCAAATGAAGCTAATCAAAGCATAATGAATCAAAAAGTTAATATGTCTGAGATTGAAATTGATTCAGTTTCAGAGGGAGGTGTTGTTAGTGATAAAGTTGATCAGGAAGAGAAAGAGACTCAAGAGGAGGAAGCATCCAAAGTTGATTTAACCCTTAAACTTTGA 705 0.3617 MCNKGKEKVNEESIANLKMMENHNNENKRKAIVLEESYVETQNSRTPQKDVVEEESTDSSKEISPFLRFGFIVDHRKGIQKAYSCKFCGRKFTSPRALGGHQNSHKLERSLKKRIQTFNNAWINYSNGDQGISLNTISPFHMGCGYQYYGFNNMIQHAGSSNFYAGNLYGALQHIPEIDEANEANQSIMNQKVNMSEIEIDSVSEGGVVSDKVDQEEKETQEEEASKVDLTLKL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2496 234 MobiDBLite consensus disorder prediction 203 234 - -
Mtr7g2496 234 MobiDBLite consensus disorder prediction 210 234 - -
Mtr7g2496 234 PANTHER EXPRESSED PROTEIN 3 234 - -
Mtr7g2496 234 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
Mtr7g2496 234 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Mtr7g2496 234 Gene3D Classic Zinc Finger 67 129 - -
Mtr7g2496 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Mtr7g2496 234 PANTHER ZINC FINGER PROTEIN JAGGED 3 234 IPR045320 GO:0003700
Mtr7g2496 234 MobiDBLite consensus disorder prediction 38 57 - -
Mtr7g2496 234 SMART c2h2final6 83 105 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2496 Mtr-Chr7 41442040 41442744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2496 53 234 C2H2 Transcription Factor Family AT5G01860 26.794 1.67e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g2496 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2496 - - mtr:MTR_7g022250 373.244