Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2495 ATGTCTGAGGACAAAAACCTCAAGCGCAAAATGATGGAGGACCCTGTGCAAGAGTCGAAATCGGAGAAGGAGCCAAAGACAACACCACCAACCTCTGGATCGGATGGTGGTGATTTCTTGACCTTGAGGCTTGGCGGTGGCACAAATCCCACTTCCAAACCCTTGGAGAAGGGTGAGCATTCAGGTTCATCTCAAAATGCTAATGTTGAACCTCCACCTGCGCCGCAAGTGAAGGAATTCTCTTGTACTTATTGTGACAAGAAATTCCCCACTTCTCAAGCGCTTGGAGGACACCAAAACGCTCATAAGCGTGAGCGTGTCTTCAAAAAAATGGAAGAACAAAGGAGAGAGGATGTAATCGATTCAGCCCTAAGGTATCAATCTAATATCCTTCCATACCCTTATCAATTTTCAAGCTCTCCACACTACCAAGGGTATTCATACTTCCGTGGTGCTAACCTATCCAACTCAATTGGTGGCCATGTGAATAATTCATTGCCTTCTTGGCTTGGTGGTGGTTCATCTTCTGGTGGCTATGGAGGGATGTATATGCCAAATACACCTCCTGCATCACGATTTGTGATGCCATTGTCAAATTCATCCCTTGCAACACCACAATTTGGGATGAATAATTTATGGGGTGGAGGTCAAAATGCTGCTGCATTACCAACTCCACAAAGATCAAACGCTGTGGGTTTGGCACTTTTAGCTCAAGCTAATCAAACCCCTCCTCCATCTTCTGAGGGTGTAGAAAGAAATTTCATTGATCAAATTCCTTCTCATGATCCTATTGAAGATGAAGATGAAGATGACATAAATGAGGCAAATCCCAATGAGGAGGAACTGAACTTGGAACTCACCCTTTAA 867 0.4429 MSEDKNLKRKMMEDPVQESKSEKEPKTTPPTSGSDGGDFLTLRLGGGTNPTSKPLEKGEHSGSSQNANVEPPPAPQVKEFSCTYCDKKFPTSQALGGHQNAHKRERVFKKMEEQRREDVIDSALRYQSNILPYPYQFSSSPHYQGYSYFRGANLSNSIGGHVNNSLPSWLGGGSSSGGYGGMYMPNTPPASRFVMPLSNSSLATPQFGMNNLWGGGQNAAALPTPQRSNAVGLALLAQANQTPPPSSEGVERNFIDQIPSHDPIEDEDEDDINEANPNEEELNLELTL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2495 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Mtr7g2495 288 MobiDBLite consensus disorder prediction 1 25 - -
Mtr7g2495 288 MobiDBLite consensus disorder prediction 54 71 - -
Mtr7g2495 288 Pfam C2H2-type zinc finger 80 104 - -
Mtr7g2495 288 MobiDBLite consensus disorder prediction 1 74 - -
Mtr7g2495 288 Gene3D Classic Zinc Finger 63 130 - -
Mtr7g2495 288 MobiDBLite consensus disorder prediction 262 278 - -
Mtr7g2495 288 MobiDBLite consensus disorder prediction 240 288 - -
Mtr7g2495 288 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Mtr7g2495 288 SUPERFAMILY beta-beta-alpha zinc fingers 78 109 IPR036236 -
Mtr7g2495 288 PANTHER ZINC FINGER PROTEIN JAGGED 48 250 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2495 Mtr-Chr7 41422599 41423465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2495 70 188 C2H2 Transcription Factor Family AT5G25160 37.500 1.58e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g2495 zf-C2H2_6 1.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2495 - - cam:101490368 207.994