Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2489 ATGAGAAAAGATAAAAAGGTTCTAATTGTCCTTGATGATGTGTGGGATATTCTAGACTTTGAGTGTATTGGACTTCCTTATCTAGAACATGAGAAATATTGCAAAATATTGCTCACATCACGGGATGAAAAAGTGTGCAAAAACTTGGGATGCAATGTGAATTTTCAAGTTTCTGTGTTGTCGGAGGATGAGGCTTGGTATCTATTTCGAGAGATGTCAGGTGGAATTGTAGATACATATGATATCAACCCAATAGCAAGTGAGGTTGCAAAGGAATGTGGTGGCTTGCCTCTTGCAATTGTGACAGTTGGAAGAGCACTAAGTAATGAAGGGAAGTCGGCATGGGAGGATGCACTTAGACATTTAAGAAATTTTCAATCATCTCCCTTCTCAGACGTTGGAAAATTTGTCTACCCCAGCATTGAGCTTAGTTTAAAGTTTTTGGACAGCAGAGAACATAAGCTCTTCCTTATGCTTTGTGGATTGTATCCAGAAGACTTTGACATTCCCATTGAAAGTTTATTGTGTCATGGTTTTGGCTTGGGTCCGTTCAAAGACATCAGTGCATCATGGGAAGCAAGAAATCGAGTGCATACATTGGTGGAAGATCTAAGGAGAAAGTTTTTATTGTTGGATAGCAGTGTGCCAGGGTGTGTGAAGATGCATGATATTGTGCGTAATGTTGTTATATCAGTAGCATTTAAAAATGCAGAAGATAAATTCATGGTAAAGTACACCTTTAAGAGTCTAAAAGAAGAGAAATTGAACGAGATCAATGCAATATCACTTATTTTGGATGATACTAAAGAGTTAGAAAATGGCTTACACTGTCCGACACTTAAAATTTTACAAGTAAGTTCAAAAAGCAAGGAACCAATGTTTTGGCCTGAACTTTTCTTCCAAAGCATGAGCACACTTAAAGTTTTATCCATGAAAAATTTATGCATTCCAAAACTGCCATATTTATCCCAAGCTTCAGTCAATCTCCACACATTGCAAGTAGAACACTGTGATGTTGGAGATATATCTATAATCGGTAAGGAACTTAAACACCTAGAAGTCCTAAGTTTTGCACATTCTAATATTAAAGAACTCCCAATTGAAATAGGAAATCTGGGCAGTGTAAGATTATTAGATTTGTCAAATTGCAATGATCTTGACATCATTTCTGATAATATCTTGATAAGATTGTCTCGGTTGGAAGAACTTTACTATAGAATAGACAATTTTCCTTGGAAAAGAAATGAAGTTGCGCTCAACGAATTGAAAAAAATATCTCATCAGCTAAAGGTTGTTGAGATAAAATTTAGGGGGGCTGAAAGTTTAGTCAAGGATTTGGACTTCAAAAACTTGCAAAAGTTTTGGGTTTATGTGGATCCATACACTGATTTTCAACGATCTTTATATTTGGACTCAACTTTATTGCAAGTTAGTGGTATAGGCTATCAATCTATTGGTAGCATATTGATGATCTCACAATTGATTAAGAAATGTGAAATCCTCGTAATAAGAAATGTGAAAGCCTTGAAAAATGTTATGCCACAAATGTCACCTGATTGTCCAATTCCATGCTTGAAAGATTTAAGGGTTGATTCATCTATTATTAGAGCAATCACCAATATTGAGAAATTGGAGATAAGATCTTGTAAGTTGATGGAGTATTTAGTGACCACTGAAGAAGATGATGAAGGTGGCCATATTAATAAAGAGGAAGTAAATATCATCTCGTTTGAAAAATTAGATTCCTTAACACTTTCAGGACTCCCAAGTATAGCACGTGTTTCTGCAAATTCTTACGAGATAGAATTTCCATCCTTAAGAAAGTTGGCTCCTTCTGTTTCTGAAACAAAACCCAAGATAGAGTTGGGTGGTGCACCTCTTCTTGAAGATTTTTATGTAAACAATTGTTGTTTGCAAGGGATGGATAAAACAAGGATAAGATGCACACCAGTTATAGACGGACACTTGTTGCCATACTTAAAATCACTAATCATGAAAAGATGTGAAAAAATAAGTGTATTGTTATCTTCTTCGTCCATGAGATGTCTTAAGCATCTAGAGAAGCTACACATATTGGAATGCGATGACTTAAATGAGGTAGTTTCTCAAGAAGAGTCAGAGTCAAATGGAGAAAAGATTGTGTTCCCTGCATTGCAACATCTATGTCTTAGAAACCTTCCAAACCTTAAGGCTTTCTTCCAAGGACCCTGTAATCTTGATTTTCCATCACTGCAAAAAGTGGACATCGAAGATTGTCCCAATATGGAACTTTTTTCACGAGGATTTAGTAGTACACCTCAGCTTGAGGGTATCAGCATGGAGATTGAATCATTCAGCAGCGGCTACATACAGAAGAATGACATGAATGCCACTATACAAAGATTTAAAGCATGTGTGGAATTACAAAGTTCTGAGATGTTGAACTGGACGGAGCTAATTGATAAAGACATGTTTGGATACTTTTTCGAAGAAGGGACAATCAACATCACAAGATTTCATAGATTATCAATGCTTGTACCATTCAGTGAGATACAAATACTTCAACATGTGAGGGAACTCAATGCAAGTGACTGTGATTCATTGGTTGAGGTGTTTGGATCAGTAGGAGAATTTACAAAAAAAAATGATGTTGCTACACATTATCATCTACAAAAGATGAGATTGGAAGACTTGGCCAGATTGAGTGACATATGGAAACACAATATCACAAGTTTTCAAAATCTTGCAAAAATTAATGTTTCTGATTGCCCCAATTTGAGGAGTTTGCTCTCCCACTCAATGGCTAGAAGCCTTGTGCAACTTCAAAAAATAGTAGTTGAGGATTGTGAAATGATGGAGGATATAATAACAATGGAAGGGGAATCTATAAAAGGAGGCAACAAAGTCAAGACATTATTTCCTAAGTTGGAGTTATTGACACTTGAATCTCTTCCTAAGCTGAAATGTATCTGTTCAGGAGATTATGACTATGATATCTCTTTATGCACTGTTGAAGTGGACAAGGAATTCAATAATAATGATAAGGTTCAGATTTCATTTCCGCAACTAAAGGAATTAGTGCTTTGTGAAGTACCAGAGCTCAAGTGTTTTTGTTCAGGAGCGTACGACTACGATATCATGGTGTCGTCAACTAATGAGTGTCCAAATATGACAAACTTACTCCATGGAAATGTTATTGTAAACACACCCAACCTTCATAATCTATGGTGGGAATGGAATTGGGATGATATTCAAACACTCGGAGACCTAAATTTGACAATATATTATCTTCATAATTCAGAGAAATACAAGTCATTCAATCCATATACTTATCCTGAACATTTGGAAGTAAGTATTTTTTGTCTTTCTTTCTTGAAGATGCAATTTAAGAATTTGAAAGGAGCTGCTACAAACAAATCTTTTCTCTTGAAAACAACAGTACATGTCAATTGTCAAGGTACATTGATTTGGCTTTATTTTGTGACAAGTACTGACAAATTTGATGTTATGTTTTCAATTGCTATTGCAATCTTCCATCATGAAACTGAATGGTTTTAA 3537 0.3565 MRKDKKVLIVLDDVWDILDFECIGLPYLEHEKYCKILLTSRDEKVCKNLGCNVNFQVSVLSEDEAWYLFREMSGGIVDTYDINPIASEVAKECGGLPLAIVTVGRALSNEGKSAWEDALRHLRNFQSSPFSDVGKFVYPSIELSLKFLDSREHKLFLMLCGLYPEDFDIPIESLLCHGFGLGPFKDISASWEARNRVHTLVEDLRRKFLLLDSSVPGCVKMHDIVRNVVISVAFKNAEDKFMVKYTFKSLKEEKLNEINAISLILDDTKELENGLHCPTLKILQVSSKSKEPMFWPELFFQSMSTLKVLSMKNLCIPKLPYLSQASVNLHTLQVEHCDVGDISIIGKELKHLEVLSFAHSNIKELPIEIGNLGSVRLLDLSNCNDLDIISDNILIRLSRLEELYYRIDNFPWKRNEVALNELKKISHQLKVVEIKFRGAESLVKDLDFKNLQKFWVYVDPYTDFQRSLYLDSTLLQVSGIGYQSIGSILMISQLIKKCEILVIRNVKALKNVMPQMSPDCPIPCLKDLRVDSSIIRAITNIEKLEIRSCKLMEYLVTTEEDDEGGHINKEEVNIISFEKLDSLTLSGLPSIARVSANSYEIEFPSLRKLAPSVSETKPKIELGGAPLLEDFYVNNCCLQGMDKTRIRCTPVIDGHLLPYLKSLIMKRCEKISVLLSSSSMRCLKHLEKLHILECDDLNEVVSQEESESNGEKIVFPALQHLCLRNLPNLKAFFQGPCNLDFPSLQKVDIEDCPNMELFSRGFSSTPQLEGISMEIESFSSGYIQKNDMNATIQRFKACVELQSSEMLNWTELIDKDMFGYFFEEGTINITRFHRLSMLVPFSEIQILQHVRELNASDCDSLVEVFGSVGEFTKKNDVATHYHLQKMRLEDLARLSDIWKHNITSFQNLAKINVSDCPNLRSLLSHSMARSLVQLQKIVVEDCEMMEDIITMEGESIKGGNKVKTLFPKLELLTLESLPKLKCICSGDYDYDISLCTVEVDKEFNNNDKVQISFPQLKELVLCEVPELKCFCSGAYDYDIMVSSTNECPNMTNLLHGNVIVNTPNLHNLWWEWNWDDIQTLGDLNLTIYYLHNSEKYKSFNPYTYPEHLEVSIFCLSFLKMQFKNLKGAATNKSFLLKTTVHVNCQGTLIWLYFVTSTDKFDVMFSIAIAIFHHETEWF* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2489 1178 Pfam NB-ARC domain 3 128 IPR002182 GO:0043531
Mtr7g2489 1178 Gene3D - 59 148 IPR042197 -
Mtr7g2489 1178 PRINTS Disease resistance protein signature 1 15 - -
Mtr7g2489 1178 PRINTS Disease resistance protein signature 93 107 - -
Mtr7g2489 1178 PRINTS Disease resistance protein signature 370 386 - -
Mtr7g2489 1178 Gene3D - 1 57 IPR027417 -
Mtr7g2489 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 159 IPR027417 -
Mtr7g2489 1178 SUPERFAMILY L domain-like 220 771 - -
Mtr7g2489 1178 PANTHER - 927 1075 - -
Mtr7g2489 1178 PANTHER - 4 552 - -
Mtr7g2489 1178 Gene3D Ribonuclease Inhibitor 300 562 IPR032675 -
Mtr7g2489 1178 Gene3D Ribonuclease Inhibitor 825 1073 IPR032675 -
Mtr7g2489 1178 Gene3D Ribonuclease Inhibitor 566 781 IPR032675 -
Mtr7g2489 1178 SUPERFAMILY RNI-like 840 1068 - -
Mtr7g2489 1178 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 4 552 - -
Mtr7g2489 1178 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 927 1075 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2489 Mtr-Chr7 41348894 41354541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2489 4 209 WRKY Transcription Factor Family AT5G45050 28.440 4.14e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2489 - - mtr:MTR_7g088650 1047.73