Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2484 ATGATGATCACCGGTGCATATTGTGCGCTAACCCGTAACCCCCTTCTGCTATCCCGCTCCTTCAACATTTTTCCTAAACCCACCCCCCTTCAATTTCCAACTACACCCTCTCCTTCGTTTCCTTCATTTAACCGCTTTCCATCTCTCTTCCCTCAACTGTGCATCCGTCATTCTCGCCTCTCCACCCTCCCTCATAATGACTCCGGCGGATTTGGCGGTGATAGTGGCTCTGGAGGATGGGATCCCGGCGACAATGATTCCGATGACGGAGGCGGAAAATGGTCATTCTTGTCATGCATTGCGAAGAAGACCGAGCCTATGAACACACTGGCATCATCTGTTTGGTGGGTTTTTGTATTTAGTTCTATTGTTGTCGGTGGTCAAGCTCTTGTGGAAGCTCCTTTTCTCCTCCTCTGGTTAACATTCGTCTGTCTAGCTTTTAACGGGTTTTGTGATGGTATCTCTTCCTTTTCGTGTTTGATAGTTTTCGGTGCTCTCTTCTGCATCATCCAAATAATAGTGTTAGCTTATGCTTTAGTGCAACCTTTGAGAATCAGAGAAGGTGCTTCAGAAGATGATATCAAGTCACTTCCTATGTATAGGTTTAGTCAGCCAAATGTAATGATTATGGTTGATAAGAACAAGAAGCAACTTGATGAAGCAAGAATTGGTTCGCACAATCAAAGCCATATCAGTGAACTATCTCTTCATCCAGATGATTCTGAGTGTTGTATATGCCTCTGTTCATATGTTGATGGAACAGAACTGTATCGCCTTCCATGTACCCACCATTTTCATTGCGAATGCATCAGTCGTTGGCTTCGGACAAAAGCAACTTGCCCACTCTGCAAATTTAATATCCGAAGAGGTGATATATTGGTTTGA 885 0.4418 MMITGAYCALTRNPLLLSRSFNIFPKPTPLQFPTTPSPSFPSFNRFPSLFPQLCIRHSRLSTLPHNDSGGFGGDSGSGGWDPGDNDSDDGGGKWSFLSCIAKKTEPMNTLASSVWWVFVFSSIVVGGQALVEAPFLLLWLTFVCLAFNGFCDGISSFSCLIVFGALFCIIQIIVLAYALVQPLRIREGASEDDIKSLPMYRFSQPNVMIMVDKNKKQLDEARIGSHNQSHISELSLHPDDSECCICLCSYVDGTELYRLPCTHHFHCECISRWLRTKATCPLCKFNIRRGDILV* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2484 294 SUPERFAMILY RING/U-box 231 287 - -
Mtr7g2484 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 291 IPR013083 -
Mtr7g2484 294 ProSiteProfiles Zinc finger RING-type profile. 243 284 IPR001841 -
Mtr7g2484 294 PANTHER RING-FINGER UBIQUITIN LIGASE 38 294 - -
Mtr7g2484 294 SMART ring_2 243 283 IPR001841 -
Mtr7g2484 294 Pfam Ring finger domain 242 284 IPR001841 -
Mtr7g2484 294 PANTHER TARGET OF ERK KINASE MPK-1 38 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2484 Mtr-Chr7 41296509 41301821 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2484 84 291 C3H Transcription Factor Family AT1G68070 42.723 9.42e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2484 - - mtr:MTR_7g088560 377.867