Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2479 ATGGAAGAAAGACAACAAGAACAACAACGCCAGGTCATCACTGTCGGAACTCTCAACTCTCTCCTCCGATCGGAGAACGATGACGACGACGGAGCATGCGTCTATTCAAGGGCGGTGCTGGTGGTCGACATGGTCTGGAACCTCGCTTTTGTGGTGGTTGCCGCCGCCGTCATCCTCTCCACTTTCAACGAGCGTCCTTCCACTCCTCTCAGACTTTGGCTCTGTGGCTATGCCTTTGAGTGTCTTCTTCATGTTGCTTTTGTTTTCTCTGAATTTCGTGTCACTACTCGTGATTCCTTCTCTCACACTCCTTACAGCATTGCGAAAAAGTTAGAGCCTATGAACACATTGGCATCATCTGTTTGGTGGGTTTTTGGATTTTATTGGATTGTTGTCGGTGGCCAACCACTTCTTGAAGATTCTCCTCGTCTCTACTGGTTAACAGTCGTCTTTCTAGCATTTGACGTATTTTTTATTATCTTTTGTATTGGGATGGCATGTATAGTTTTCTTCGCTCTCTTCTGCATCATCCCAATAATAGCGTTAGCTTATGCTTTAAGAATCAGAGAAGGTGCTTCGGAAGATGATATCAGCTCACTTCCTATGTATAGGTTTAGTCAGTCAAATGTAATGGTTATGGTTGATGACAACAAGAAGCAACATGTTAAAGCAAAAATCGGTTCATACAATCCAAGCCATATCAGTGAACTATCTCTTCATCCAGATGATTCTGAATGTTGTATCTGCCTGTGTCCATATGTTGATGGAACAGAACTGTATCGCCTTCCATGTACCCACCATTTTCATTGTGCATGCATCAGCCGTTGGCTTCGGACAAAAGCAACTTGTCCGCTCTGCAAATATAATATCCGAAGAGCCGATACATTGGTCTAA 894 0.4385 MEERQQEQQRQVITVGTLNSLLRSENDDDDGACVYSRAVLVVDMVWNLAFVVVAAAVILSTFNERPSTPLRLWLCGYAFECLLHVAFVFSEFRVTTRDSFSHTPYSIAKKLEPMNTLASSVWWVFGFYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIALAYALRIREGASEDDISSLPMYRFSQSNVMVMVDDNKKQHVKAKIGSYNPSHISELSLHPDDSECCICLCPYVDGTELYRLPCTHHFHCACISRWLRTKATCPLCKYNIRRADTLV* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2479 297 ProSiteProfiles Zinc finger RING-type profile. 246 287 IPR001841 -
Mtr7g2479 297 SUPERFAMILY RING/U-box 232 291 - -
Mtr7g2479 297 Pfam Ring finger domain 245 287 IPR001841 -
Mtr7g2479 297 PANTHER RING-FINGER UBIQUITIN LIGASE 21 297 - -
Mtr7g2479 297 SMART ring_2 246 286 IPR001841 -
Mtr7g2479 297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 295 IPR013083 -
Mtr7g2479 297 PANTHER TARGET OF ERK KINASE MPK-1 21 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2479 Mtr-Chr7 41266638 41269899 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2479 35 294 C3H Transcription Factor Family AT1G68070 46.595 8.11e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2479 - - gmx:100808066 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2479 7 41266638 41269899 Mtr7g2479 7 41266638 41269899 ECH