Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2462 ATGGCTCCAGAGAAAGAAGCTGTTCTTGCAACCACTCTCTCTGCCTCTGAATCTGATCCTCCCACCATGTTTGACAGGAGTATTATCAAAAGGGAAAATCCTTCTACTGTGTTTTATGAGGATGATGAGGTCCTTGCCTTTAGAGATATAGCTCCTGAAGCTCCTCCCCATATTATAATAATTCCAAAATCTAGAAATGGGTTGACTGGTCTATCTAAGGCTCAAGTCCCACAATTTTCAAGCCCAGTCGGGTTGAATAATATTACACTCGGTGAAGAACAACAATCAACTCAAAAAAGGAAAAGAACAAGGTTTACCCCTGGAGAAGATAAAGTTCTCATCCAAGCATGGCTCATCGTTCCCAAGAATGCAGCTGCGGAGGCAAATCAAAGAGTAGATTCCTTTTGGCTAAGAATTAAGAATACTTACAATGAGCATCGCGGCCATTTCAAACCGAGGGGAGTATCACAAATAAAATCGCGATGGCATAAGTTGAATAGCATAGTTCATAAATTTGTAGGGTGCTACAAAGTAGCCTTTGAGAAAAAGAAAAGTGGTAGCTCTGAGTCTGACATCATGGGAGAAGCATATACACTTTATTATCAAGATGAAGGCGAACAGTTCAAATTAGAGTATGCATGGCGATTGTTGAAAGATGAACCTAAATGGTCAAATACATCATTTGAAGTAGGCGGTAAGAGAACCAAGATTTCTGCTTCAGGAGCATACTCGACCACCTCTAATCTAGACACGCCATCAAGTTGTGAATACAATGCAGCATCACCTACCTTGCTTTGTCTAACAGGGACAGAAGTAGAGGAAAGAAAGGGAAAATCAAAATCGGAAGAAACATCTTCGGTGGTTTGTCTTTGTCAAACAGGGACTGAAGTAGAGAAAGGAAAGGAAAAATCAAAATCGGAGGAAACATCTTCTGTTAATGTTGAGCTAATTGAAGTGAAAGAGATTCCAAAGACAAAAGTTCTTGTCATGGCAGAAATGGCGCGTGTTCAAGATGAGCAAAATAAGTTGAAGGAGAAAGAGTTGAATTTGAGGGAGAGAGAGTTTGAGTTGGAGTTCCTTTTTAAGGATATATCCGGGATGAAAGCCAGACAACAACGAGATCATGAGATGCTGTGTAATGTGATTAGAGAAAAATATGGCATTATGTAA 1170 0.4 MAPEKEAVLATTLSASESDPPTMFDRSIIKRENPSTVFYEDDEVLAFRDIAPEAPPHIIIIPKSRNGLTGLSKAQVPQFSSPVGLNNITLGEEQQSTQKRKRTRFTPGEDKVLIQAWLIVPKNAAAEANQRVDSFWLRIKNTYNEHRGHFKPRGVSQIKSRWHKLNSIVHKFVGCYKVAFEKKKSGSSESDIMGEAYTLYYQDEGEQFKLEYAWRLLKDEPKWSNTSFEVGGKRTKISASGAYSTTSNLDTPSSCEYNAASPTLLCLTGTEVEERKGKSKSEETSSVVCLCQTGTEVEKGKEKSKSEETSSVNVELIEVKEIPKTKVLVMAEMARVQDEQNKLKEKELNLREREFELEFLFKDISGMKARQQRDHEMLCNVIREKYGIM* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2462 389 MobiDBLite consensus disorder prediction 1 24 - -
Mtr7g2462 389 Gene3D - 6 144 IPR036265 -
Mtr7g2462 389 SUPERFAMILY HIT-like 27 64 IPR036265 -
Mtr7g2462 389 PANTHER OS07G0575233 PROTEIN 89 358 - -
Mtr7g2462 389 PRINTS Histidine triad family signature 24 40 IPR001310 -
Mtr7g2462 389 PRINTS Histidine triad family signature 45 63 IPR001310 -
Mtr7g2462 389 Coils Coil 329 356 - -
Mtr7g2462 389 Pfam HIT domain 30 75 IPR011146 GO:0003824
Mtr7g2462 389 Pfam No apical meristem-associated C-terminal domain 207 372 IPR029466 -
Mtr7g2462 389 PANTHER - 89 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2462 Mtr-Chr7 41095646 41101891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2462 73 248 Glutathione S-transferase Gene Family AT5G41240 34.409 9.34e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2462 - - mtr:MTR_7g088160 714.531