Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2459 ATGTATCATGCAAAGAAGTTTCCGGAGGAGACGATGATGCTACATAAATCTCAAGGTGGTGGTGGTGGTGGTGGTGAACAGTTTGCAAATGGTGGGGGTTTGAATGGATCTGCTGTGAAAAATGTTCAACCTGCTGGAGGAGGTGGGAAGCAGCGTTTGCGTTGGACGTCGGATCTTCATGACCGTTTTGTCGATGCTATTACGCAGCTTGGTGGACCAGATAGAGCAACACCCAAAGGTGTTCTGAGAGTGATGGGCGTGCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAGTATCGCCTGGCGAAGTACTTGCCTGAATCACCAGGTGATGGTAAAGATTCTAAAGATGAGAAAAGGAATTCTGGAGACAGCATTTCTGGCGCTGATTCTTCCCCGGGATTGCAAATCAATGACGCACTACGAATGCAGATGGAGGTTCAAAAACGTCTGCATGAACAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCCCAGGGTAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAATTAGGCAGTACCTTGGCAGCATCGGAAACACTTCCGTTGTCCCATGATAAGCAAAACCAGCCCCTATCAGAGCCTTCTGGGTCTAGTGATGCCCTTGCAGACACTTTTTCTCCCCATAAAAAACAGAGAATTGATGAAGGTTCAAAGGATGGCACTGCACCCCAAGTTACAATAAAGACTGCTCAGAAGAATGATTGTAATGTTGGTCCTTTGGATCCAAACTTGTATGAAGATGATGCTGGCTATGGATTTGATTTGGAGACAGAAAATGACGACGGCAATGAGTGA 840 0.4524 MYHAKKFPEETMMLHKSQGGGGGGGEQFANGGGLNGSAVKNVQPAGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPGDGKDSKDEKRNSGDSISGADSSPGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLAASETLPLSHDKQNQPLSEPSGSSDALADTFSPHKKQRIDEGSKDGTAPQVTIKTAQKNDCNVGPLDPNLYEDDAGYGFDLETENDDGNE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2459 279 MobiDBLite consensus disorder prediction 193 219 - -
Mtr7g2459 279 MobiDBLite consensus disorder prediction 110 127 - -
Mtr7g2459 279 MobiDBLite consensus disorder prediction 108 139 - -
Mtr7g2459 279 Gene3D - 49 108 - -
Mtr7g2459 279 Pfam MYB-CC type transfactor, LHEQLE motif 138 184 IPR025756 -
Mtr7g2459 279 PANTHER OS05G0491500 PROTEIN 2 273 - -
Mtr7g2459 279 SUPERFAMILY Homeodomain-like 50 104 IPR009057 -
Mtr7g2459 279 MobiDBLite consensus disorder prediction 193 279 - -
Mtr7g2459 279 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 50 105 IPR006447 GO:0003677
Mtr7g2459 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 107 IPR017930 -
Mtr7g2459 279 Pfam Myb-like DNA-binding domain 53 103 IPR001005 -
Mtr7g2459 279 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 273 IPR044848 GO:0003700
Mtr7g2459 279 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2459 Mtr-Chr7 41055411 41060727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2459 45 198 G2-like Transcription Factor Family AT3G13040 52.564 8.49e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr7g2459 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2459 - - gmx:100783132 422.935