Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2427 ATGGCTTTATTCTTGAAGGAGAATGCTCTCAAAAGGGCAGAAGAGTTAATCAATGTGGAGCAGAAGCAGGGTGCTCTTCAGACGCTGCACGATGTTATTACTTCGAAAAGATACCGATCATGGCAGGAAATACAAGAAAAGATTATGTTTAAGTATGTAGAGTTGTGTGTAGACTTGCGGAAAGGACAGTTTGCGAAGGATGGGTTGATTCATTATCGGATCATATGTCAGCAAGTGAATGTTGGTTCGCTGGAGGAGGTGGTTAAGCGTTTTATTCACCTGTCAACGGAGAAAGCTGAAAAAGCCTGTAGTCAGGCTCGGGAAATGGAACAAGCCCTCGATGTTGATGACTTAGAGGCGGATAAAAGGCCAGAGGACTTGTTGAAGTGCTATGTCAGTGAGGAGAAAGGAAAAGATAGATCTGATCGGGAGCTTGTTACCGCACGATTTAAATTTCTCTGGGAAACTTACAGGATAGTGCTTGAAGTATTGCGGAACAACTCAAAATTCGAAGCTTTATATGCTATGACAGCTTATCGAGCTCTCCAGTTTTGTAAGCAGTACAAAAGGAAAACAGAATTTAGAAGACTCTGCGAAATCTTAAGAAACCATTTGGCTAATCTTAACAAATATCCGGACCAACGTGACCGACCTGATCTTTCTGCTCCTGAAAGCTTGCAATTGTATCTTGATACTAGATTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGAAGGAAGCCTTTAGATCTGTTGAAGATATACATGGCCTAATGTGCATGGCCAAGAAAACATTGAAACCATCCTTGATGACGGTTTACTATGCGACGTTGATCGAAATATTTTGGATATCTTCAAGTCATTTATATCATGCATATGCATGGTTCAAGCTCTTTTTGTTACAAAAAAGCTTCAACAAAGATCTGAGTCAGAAGGATTTGGAGTTCATAGCATCATCTGTTGTTCTAGCTGCACTTTCAGTGCCTCCTCATGATCGTAATTTAGAACTAGAGCATGAAAAGGAGCGAAATTTGAGGATGGCTAATCTCATTGGCTTTAATCTTAAAAATAAGATGAATAGCAGCAAAGTGCTCTCAAGGTCATCACTTCTTGCTGAACTGGCATCAAAGGGTGTAATGTCTTGTGTTGCACAAGAAGTGAAGGACATTTACTATCTTTTGGAAAACAAATTTCTTCCCTCAGACTTTGCACTTAAAGTACCACCCTTGCTAAATAAAATTTCAAAATTAGGGGGTAAGTTTTCGTTTGCTTCATCAGTTCCAGAGGTACAATTGTCGCAGTATGTCCCAGCACTTAAAAAGTTAGCTACTCTGAGGTTGCTACAACAGGTGTCCAATGTGTACCAGACAATGAAGGTTGAGAACTTAGCTGGGATGATGCCTTTCTCTGATTTTTCCGTTGTGGAAAAAATCTCTGTAGATGCTGTTAATCAGAAATTTCTATCGATGAAAGTTGACCACATGAAAAAAGTTGTAATTTTCTGCAAGAAGAGTCTTGAGGCTGATGGCTTAAGGGATCACTTGGCCAGTTCCGCTTTGAATAAGGCAAGGGAAATGATATCTCCTCCTGATAGGAAACAATCAAAACTTGGACCCTTGCTCCCATCTTTGTTAGAGGTTGTGGCCAAAGATCACAAGATTCTCCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGTACAAGAACGGAAGCCTCTTGAAACGGAACAAGAGGAGGAATCAAAAGAAGCCGCGGAACAAAGGCAGCTTTTAACTGTGTTTAATAGTGAGCATAGGAGGAATCAAAGGATTCACCGAGAAATAGCCGAAAGAGAACATGAAGAAGCTGAAAGGCATAGAAATGAGGAATTGAATTTGACTAACCAACTCAGGATGAGACAAGAAATGGAGAAGAAACTGAAAAAATTAAGTAAAACCATGGATTTTTTGGAAAGAGCTAAGAGAGAAGAGTCTGCTCCGCTAATCGAAGCGGCATATCAACAACGCCTAGTGGAAGAGAGGATTCTTCATGAGCGTGAGCAACAACAAGAGGCTGAACTGAAGGAGCGGCTTAGTCATAGGATGGAGAATAAAATATTTGAAGAGAAAGTTTTCAATCGTCGGAAAGTAGAATTTAACCGACTGGGGGGAGAGAGGGAGGAATCCAGGAAACAGGAGAGGGAAAAAATGAGGAAGTTGAAGCATTATCTTCGGTTGGAAGAACAGAGACAGCAAAAATTGAATGAGGAGGAAGAAGCTCGGAAGCATGAAGAGGCTGAGAGAAAAAAGAAGGAAGAGACCGAACGCTTAGCGAAATTGGCAGAGATACTTGAAAAGCAGAGGCAAAGAGAAAGAGAAGTTGAAGAAAAGGCTGAGAAGCAAAAGAGGGAAGCATTGGCAGGCAAACCTAATGAACCAGCTTTGAGGCCTTATAAGCCTCCTCCTGCCCGTCGTTCATTGGAGTCTGATACTGCTGCACCTGCAACTTCCTCAGCCCCAGCTCCAGGGAAATACATTCCCAAGTTCCGGCGAGGAGGAGCTTAA 2550 0.4157 MALFLKENALKRAEELINVEQKQGALQTLHDVITSKRYRSWQEIQEKIMFKYVELCVDLRKGQFAKDGLIHYRIICQQVNVGSLEEVVKRFIHLSTEKAEKACSQAREMEQALDVDDLEADKRPEDLLKCYVSEEKGKDRSDRELVTARFKFLWETYRIVLEVLRNNSKFEALYAMTAYRALQFCKQYKRKTEFRRLCEILRNHLANLNKYPDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWKEAFRSVEDIHGLMCMAKKTLKPSLMTVYYATLIEIFWISSSHLYHAYAWFKLFLLQKSFNKDLSQKDLEFIASSVVLAALSVPPHDRNLELEHEKERNLRMANLIGFNLKNKMNSSKVLSRSSLLAELASKGVMSCVAQEVKDIYYLLENKFLPSDFALKVPPLLNKISKLGGKFSFASSVPEVQLSQYVPALKKLATLRLLQQVSNVYQTMKVENLAGMMPFSDFSVVEKISVDAVNQKFLSMKVDHMKKVVIFCKKSLEADGLRDHLASSALNKAREMISPPDRKQSKLGPLLPSLLEVVAKDHKILLARKSIIEKRKEVQERKPLETEQEEESKEAAEQRQLLTVFNSEHRRNQRIHREIAEREHEEAERHRNEELNLTNQLRMRQEMEKKLKKLSKTMDFLERAKREESAPLIEAAYQQRLVEERILHEREQQQEAELKERLSHRMENKIFEEKVFNRRKVEFNRLGGEREESRKQEREKMRKLKHYLRLEEQRQQKLNEEEEARKHEEAERKKKEETERLAKLAEILEKQRQREREVEEKAEKQKREALAGKPNEPALRPYKPPPARRSLESDTAAPATSSAPAPGKYIPKFRRGGA* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2427 849 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 849 IPR027512 GO:0005852
Mtr7g2427 849 Gene3D UVR domain 216 267 - -
Mtr7g2427 849 Pfam PCI domain 367 502 IPR000717 -
Mtr7g2427 849 ProSiteProfiles PCI domain profile. 315 507 IPR000717 -
Mtr7g2427 849 Coils Coil 732 799 - -
Mtr7g2427 849 MobiDBLite consensus disorder prediction 717 849 - -
Mtr7g2427 849 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 435 524 - -
Mtr7g2427 849 MobiDBLite consensus disorder prediction 569 588 - -
Mtr7g2427 849 Gene3D - 268 341 - -
Mtr7g2427 849 Gene3D - 342 489 - -
Mtr7g2427 849 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 6 619 - -
Mtr7g2427 849 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 625 848 - -
Mtr7g2427 849 Coils Coil 601 655 - -
Mtr7g2427 849 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 6 619 IPR027512 GO:0005852
Mtr7g2427 849 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 625 848 IPR027512 GO:0005852
Mtr7g2427 849 SMART PINT_4 435 524 IPR000717 -
Mtr7g2427 849 MobiDBLite consensus disorder prediction 717 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2427 Mtr-Chr7 40709426 40715280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2427 1 846 Eukaryotic Initiation Factors Gene Family AT4G11420 61.639 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2427 K03254 - gmx:100803796 1109.75