Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2416 ATGACTTCACAAAAGTTCAACAATGGTGATATGAGTCTTTTTCCTTTAGCTCCTATTCCTTCAACTCATCCTTTTGATTCCAAAGCTCTTCCTTTGACAAACCTTGAAAAGGGTCTTCAGATTTTGAGACCCTCAATGTTTAAGTCCAAAGTAGAAGATGGGTGCTTTGAGGTTCAAGGAAAAAACCTGTCTTTGAAACTTGGTAATGAAGTAGAAGATAAAAGCTCTGTTTCTGTGAAAGTTGGATACTCTAAGCTTTGTTCTAGAGGTCATTGGAGACCAATAGAAGATGCTAAACTTAAGGAGCTTGTTGCTGAATATGGTCCTCAAAATTGGAACTTGATAGCAGAACATCTTGAAGGAAGATCAGGAAAAAGTTGTAGATTAAGGTGGTTCAATCAGCTAGACCCAAGAATCAACAAAAAAACCTTTTCTGAGGAGGAAGAAGAGAGGCTTTTATCTGCTCATAAAATGTATGGTAACAAATGGGCTATAATTGCTAGACTTTTTCCAGGGAGGACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGAAGACATAGGGAACAGTGTACTGTGTATAGAAGGAGAAAGCCAGTTGTTGTTGAAAGTCTTTCAAAGGATTTAAAGTTAAGTCTTTCAAACAATGCAGCTAGTGATTCAACTATCTCAAGCACCATTGATGGAAATGTCTCAACTTGCACTAATCTTTTACTCACTCCTTCTTCAGCTAAACTAGTTGTTCCTGTTGAGAATCACCAAGGCTATGGATCACTAATGGACAAATCTAGAGAAAGTGTGGTGGCAACTAGGGATGTGAATTTTGACAAGTATTTTGGAGCTTGTAAGAAGAATGAACAAGTGGAAAAGCTAAAGCTAATAGATGTGGTGGTGGACCAGTCCAATTTTTCAGATTCAAACTCTGAAGTATCAGTATCTGAGTCAGTTACCACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGGTGTTAAGATTAACATGTTACTACCATTCATTGATTTTCTTGGAGTAGGAGCTATACAAAGCTAA 1071 0.3744 MTSQKFNNGDMSLFPLAPIPSTHPFDSKALPLTNLEKGLQILRPSMFKSKVEDGCFEVQGKNLSLKLGNEVEDKSSVSVKVGYSKLCSRGHWRPIEDAKLKELVAEYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINKKTFSEEEEERLLSAHKMYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQCTVYRRRKPVVVESLSKDLKLSLSNNAASDSTISSTIDGNVSTCTNLLLTPSSAKLVVPVENHQGYGSLMDKSRESVVATRDVNFDKYFGACKKNEQVEKLKLIDVVVDQSNFSDSNSEVSVSESVTTNRSNISISGESENVGVKINMLLPFIDFLGVGAIQS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2416 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 135 IPR017930 -
Mtr7g2416 356 PANTHER MYB PROTEIN-RELATED 62 353 - -
Mtr7g2416 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 190 IPR017930 -
Mtr7g2416 356 SUPERFAMILY Homeodomain-like 89 182 IPR009057 -
Mtr7g2416 356 PANTHER OS08G0435700 PROTEIN 62 353 - -
Mtr7g2416 356 CDD SANT 92 133 IPR001005 -
Mtr7g2416 356 SMART sant 88 137 IPR001005 -
Mtr7g2416 356 SMART sant 140 188 IPR001005 -
Mtr7g2416 356 ProSiteProfiles Myb-like domain profile. 89 135 IPR001005 -
Mtr7g2416 356 CDD SANT 152 183 IPR001005 -
Mtr7g2416 356 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Mtr7g2416 356 Pfam Myb-like DNA-binding domain 141 184 IPR001005 -
Mtr7g2416 356 Gene3D - 89 140 - -
Mtr7g2416 356 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Mtr7g2416 356 Gene3D - 142 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2416 Mtr-Chr7 40588576 40591113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2416 84 353 MYB Transcription Factor Family AT5G17800 45.390 4.26e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g2416 Myb_DNA-binding 8.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2416 K09422 - gmx:100791795 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2416 7 40588576 40591113 Mtr7g2416 7 40588576 40591113 ECH