Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2415 ATGGAAGATAAGATGCAACATGACCCCCCCAACAACACTCCAACCCAACATGGTTCCGAGAAAACTGAACCGGTTAGGTCAAGGTGGACACCAAAACCAGAACAAATTCTCATACTTGAGTCCATCTTCAACAGTGGCATGGTGAATCCCCCAAAAGAAGAAACTATCAAAATAAGAAAACTTCTTGAGAAATTCGGCAACGTCGGTGACGCCAACGTCTTCTACTGGTTCCAAAACCGCCGGTCTAGATCTCGCCGCCGACAACGCCAGATGCAGCAGGCCACACTTGATCAGCAAAGAAATCAGATGGCTATGATGCAGCCTCAGCAAGTTGTTAACGATGGTGCAAGTGCAATTCCTTGTGATATGGTTCAAACCAACCCAACCATGGTTTTTGGTGGTTCCTCTTCTTGTTTAAATGATTCTTCCGGTTCTTCCTCTTCATCATGTGGTGGTGTTCTTAGTGGTCAACAAGGCATGGATGGTTTGTTTTCAGTTTCTTCTCAAATGGGTTTTCTTGGAGTTGATCAAACTTTAGCTGCACCATCACTTTTGTGCCCTTCTCTTTCTCCTAATTTCAACTATCACTCTGGATTTGGAGGTGCTAGTACTGTAACAGGATTGGCAACAGTGTTTATCAATGGGATTGCAACAGAAATTCAAGCAGGGCCACTAGACATCAAAACAGTGTTTGGAGAAGATGTGATGTTAGTTCATTCCTCTGGTGTGCCAGTTCCCACAAATGAACATGGCATCTTGATTCAGAGCTTGCACCATGGTGAAAGCTACTTTCTGGTATCAAAGTCAGCACAAGTTTGA 819 0.4408 MEDKMQHDPPNNTPTQHGSEKTEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQQATLDQQRNQMAMMQPQQVVNDGASAIPCDMVQTNPTMVFGGSSSCLNDSSGSSSSSCGGVLSGQQGMDGLFSVSSQMGFLGVDQTLAAPSLLCPSLSPNFNYHSGFGGASTVTGLATVFINGIATEIQAGPLDIKTVFGEDVMLVHSSGVPVPTNEHGILIQSLHHGESYFLVSKSAQV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2415 272 MobiDBLite consensus disorder prediction 1 30 - -
Mtr7g2415 272 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Mtr7g2415 272 SUPERFAMILY Homeodomain-like 19 93 IPR009057 -
Mtr7g2415 272 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 269 IPR044558 GO:0003700|GO:0048830
Mtr7g2415 272 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Mtr7g2415 272 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 269 - -
Mtr7g2415 272 Gene3D - 24 94 - -
Mtr7g2415 272 SMART HOX_1 24 91 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2415 Mtr-Chr7 40577202 40581067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2415 12 272 Wox Gene Family AT3G03660 49.821 2.69e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr7g2415 Homeodomain 9.2e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2415 7 40577202 40581067 Mtr7g2415 7 40577202 40581067 ECH