Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2413 ATGACAGACCCTGCATTATCCATCTACAATTTCCTGTCAAGAGAAGGTGCAAAAAGACATTACCCACCTCTACCACCACCTTCAACACGCACTTTTCAGTGCCACTTCTGCCACCGCAAGTTCTACTCTTCTCAAGCTCTTGGTGGCCACCAGAACGCACACAAGCTAGAGAGAGCTGCTGCAAGAAGATCAACCAAGCCTCTCCATAATTTTCATCATCATCATCATCATAACAATAATAATGGGTCCTTTCACCCTTCTTCTCTTATAATCACTGACCTAAGGCCCAAGCCCAAGCCCCAAAAAGAATCTGCTCGTTTCTTCCACAACTACCCCTTGCTAGAAGTTGAGCCTTTTCATCAGCTCCATGCTGGCACTTCCATAATTTCTCATGAATACGATACTCCTCCTCCTGCTGAACCTTCTGATCATGCCAATCTTGACCTCACCCTTCGTTTGTGA 462 0.4567 MTDPALSIYNFLSREGAKRHYPPLPPPSTRTFQCHFCHRKFYSSQALGGHQNAHKLERAAARRSTKPLHNFHHHHHHNNNNGSFHPSSLIITDLRPKPKPQKESARFFHNYPLLEVEPFHQLHAGTSIISHEYDTPPPAEPSDHANLDLTLRL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2413 153 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Mtr7g2413 153 PANTHER ZINC FINGER PROTEIN 4-LIKE 22 153 - -
Mtr7g2413 153 SUPERFAMILY beta-beta-alpha zinc fingers 29 59 IPR036236 -
Mtr7g2413 153 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Mtr7g2413 153 PANTHER ZINC FINGER PROTEIN 4-LIKE 22 153 - -
Mtr7g2413 153 MobiDBLite consensus disorder prediction 130 153 - -
Mtr7g2413 153 MobiDBLite consensus disorder prediction 69 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2413 Mtr-Chr7 40545977 40546438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2413 30 75 C2H2 Transcription Factor Family AT1G24625 63.043 2.84e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2413 - - mtr:MTR_7g086860 312.768