Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2356 ATGGAAATTCAATTTCAGCAACCAAACATGCAGAATCAGAAAGCAGGAATTTCAGTAACCAACAAAGGAGGAAAATTCAAAGGAAGAAACAGAAACAGCAATAACACAAACAAGTTTGTTGGTGTTAGGCAAAGGCCATCAGGGAGATGGGTAGCTGAGATCAAAGACACAACTCAGAAGATAAGAATGTGGCTTGGAACATTTGAGACAGCTGAGGAAGCAGCTAGAGCTTATGATGAAGCTGCATGCCTTCTTCGAGGTTCGAACACTCGAACCAACTTCATCACTCATGTCTCATTGGATTCTCCTCTTGCTTCCAGGATAAGAAATCTTCTTAACAACAGAAAAGGCGACAAAAAACAGGAAGATGGTGCTGTTGCTTCTGCTCCAAGTAACAGCAAAACTACCATTAGTAATACTAGTACAATTACAAGCAATGATGATAACAAGGAGAGCACTCTTTCGACCTGTGCTACTCGAAATACAGAACTATTTGAGGATGCTTACAAACCAGATTTGAGCAATTGCAAGGAAGTTTTTGAGTCAGGTTCACAATCCAACATTTCATGTGGTTTTGGACCTTTCTTTGATCATTTTTCTTTTACTCAGTTATTGGATATGGCGAAGAATGATGACATAACCGATGCATCTAGCTTGGAGCTTTCAGAATTTGAAAGAATGAAGGTTGAAAGACAGATATCAGCTTCACTTTATGCTATTAATGGAGTGCATGAATACATGGAAACTGTTCAAGAGTCTAATGAAGCCTTATGGGATCTTCCACCCTTGTGCTCCTTGTTCTGTTAA 807 0.3941 MEIQFQQPNMQNQKAGISVTNKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGDKKQEDGAVASAPSNSKTTISNTSTITSNDDNKESTLSTCATRNTELFEDAYKPDLSNCKEVFESGSQSNISCGFGPFFDHFSFTQLLDMAKNDDITDASSLELSEFERMKVERQISASLYAINGVHEYMETVQESNEALWDLPPLCSLFC* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2356 268 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Mtr7g2356 268 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Mtr7g2356 268 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Mtr7g2356 268 MobiDBLite consensus disorder prediction 126 154 - -
Mtr7g2356 268 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Mtr7g2356 268 MobiDBLite consensus disorder prediction 1 36 - -
Mtr7g2356 268 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Mtr7g2356 268 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Mtr7g2356 268 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Mtr7g2356 268 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 12 255 - -
Mtr7g2356 268 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 255 - -
Mtr7g2356 268 MobiDBLite consensus disorder prediction 114 154 - -
Mtr7g2356 268 CDD AP2 38 94 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2356 Mtr-Chr7 40037044 40038440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2356 25 268 AP2-EREBP Transcription Factor Family AT5G19790 44.015 2.52e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g2356 AP2 5.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2356 K09286 - gmx:100796898 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2356 7 40037044 40038440 Mtr7g2356 7 40037044 40038440 ECH
Mtr7g2356 7 40037044 40038440 Mtr6g0823 6 10504336 10505548 PCT