Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2340 ATGGCAATTGCACGCACTGGAGTCTACGTCGATGACTATTTGGAGTATGCCAATACATTGCCCGCTGAGCTTCAGAGACTTCTCAACACCGTTCGTGAACTCGATGAACGATCCCAATCTATGATAAACCAGACAAGGCAGCAGACAAAGTACTGTATGGGGTTCTCTTCTCATGGCTCTAAGAAGGGTAATCATAATTATAATAACAATTATATGAATGAGGATGACGATGCTTCCATTGAGAAAATGCGAAAAGAAATTGAGGCGAATCAGGATAGCGCATTAAGTTTATGTACTGAGAAGGTTTTGTTGGCACGACAAGCATATGAACTGATAGACAGCCATGTAAAACGACTTGATGAGGATTTAACCTACTTCGCTGAAGATCTAAAGCAAGAGGGGAAAATATCACAAGACGAGCCAGCAATTCTTCCCCCACTGCCTATTGTCCCTAAACCTGAAAAGCGCAGGCACGCATATGGTACACCTCAATCGAAGAGACTTGATTACAGGGAGAGAGACTGGGATAGAGACTTTGAGCTAATGCCTCCACCAGGAAGCCATAAGAAGGACTATATGATCCCTATGGATATTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCTTTTGGAGATATGATTGCTTGTGACAACGAAAATTGCCGAGGAGGTGAATGGTTCCACTATTCATGTGTTGGCCTAACACAAGAGACAAGGTTCAAGGGAAAGTGGTATTGCCCAACGTGCAGATTACTACCACAATGTCAATGA 792 0.428 MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGSKKGNHNYNNNYMNEDDDASIEKMRKEIEANQDSALSLCTEKVLLARQAYELIDSHVKRLDEDLTYFAEDLKQEGKISQDEPAILPPLPIVPKPEKRRHAYGTPQSKRLDYRERDWDRDFELMPPPGSHKKDYMIPMDIDQPIDPNEPTYCVCHQVSFGDMIACDNENCRGGEWFHYSCVGLTQETRFKGKWYCPTCRLLPQCQ* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2340 263 SMART PHD_3 209 257 IPR001965 -
Mtr7g2340 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 258 IPR013083 -
Mtr7g2340 263 Gene3D - 5 124 - -
Mtr7g2340 263 PANTHER PHD FINGER PROTEIN ING2 2 259 - -
Mtr7g2340 263 Coils Coil 24 44 - -
Mtr7g2340 263 ProSiteProfiles Zinc finger PHD-type profile. 207 259 IPR019787 -
Mtr7g2340 263 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 125 IPR024610 -
Mtr7g2340 263 PANTHER INHIBITOR OF GROWTH PROTEIN 2 259 IPR028651 -
Mtr7g2340 263 CDD ING_plant 19 123 - -
Mtr7g2340 263 SUPERFAMILY FYVE/PHD zinc finger 184 258 IPR011011 -
Mtr7g2340 263 Pfam PHD-finger 209 257 IPR019787 -
Mtr7g2340 263 SMART ING_2 9 126 IPR024610 -
Mtr7g2340 263 MobiDBLite consensus disorder prediction 141 162 - -
Mtr7g2340 263 CDD PHD_ING 209 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2340 Mtr-Chr7 39869903 39872420 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mtr7g2340 ING 1.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2340 K11346 - gmx:100787916 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2340 7 39869903 39872420 Mtr7g2340 7 39869903 39872420 ECH