Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2337 ATGGATGTGTGCCAAAATGTACAAGTTTCTAGTGAGTGCAAACAAGAGAAGGTTCTTAACCCTTCTTGCTCTAACCTTTCAAGTAGCCTTGATGACCTCTTTTCTGCTCAAAACATGGAAGTGGATGTTGGAATGGAGTGGCTTTCAGTGTTTGTTGAAGATTGTTTCTCAAGCCCACAAAGTTGTGTACTTTTACCCTCAAGTGTTCAAAACACAACAAGTACTGTCTCATCAAAACCTTCAAACACAGTGAAGAAACCAAAGCAAGAACAAAATGAGTCACCATTTGCAGTTCCAGGCAAAGCAAGAAGCAAAAGGAAGAGACTTTCAGCTCCAAGAAGACCAAAAGACCCTTTAAGCATCTTATCCAATACCTTAAACCCTCAAAATGAGTCACTATGTTCTGACCCACCTCTCTTAAAACAAGCTTATTGGTTAGCTGATAGTGAACTCATGGTACCTAAGGGTGAAAAAGAGGTAACAAAAGATTGTGAAGTGGTTGAAAAGGAAAGGTTTGATTTTGAAGGGTTTGTTAACAATGGTCAAAATCCAATTCCAACAAGGAGGTGTACACATTGTTTGTCACAAAGGACCCCACAATGGAGGGCAGGCCCATTAGGCCCAAAGACACTATGCAATGCATGTGGTGTGAGGTACAAATCTGGTAGGTTGTTGCCAGAGTATAGACCTGCTAAGAGTCCAACTTTTGTGAGCTTTTTGCATTCAAATTCACACAAGAAAGTTATGGAGATGAGGATGAATGTTGTATCTTCCATTAATCCTCCTAGTGAGTAG 795 0.4038 MDVCQNVQVSSECKQEKVLNPSCSNLSSSLDDLFSAQNMEVDVGMEWLSVFVEDCFSSPQSCVLLPSSVQNTTSTVSSKPSNTVKKPKQEQNESPFAVPGKARSKRKRLSAPRRPKDPLSILSNTLNPQNESLCSDPPLLKQAYWLADSELMVPKGEKEVTKDCEVVEKERFDFEGFVNNGQNPIPTRRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSFLHSNSHKKVMEMRMNVVSSINPPSE* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2337 264 Pfam GATA zinc finger 190 224 IPR000679 GO:0006355|GO:0043565
Mtr7g2337 264 Gene3D - 183 253 IPR013088 GO:0006355|GO:0008270
Mtr7g2337 264 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 187 248 - -
Mtr7g2337 264 SMART GATA_3 184 238 IPR000679 GO:0006355|GO:0043565
Mtr7g2337 264 MobiDBLite consensus disorder prediction 71 90 - -
Mtr7g2337 264 ProSitePatterns GATA-type zinc finger domain. 190 215 IPR000679 GO:0006355|GO:0043565
Mtr7g2337 264 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 261 - -
Mtr7g2337 264 PANTHER GATA TRANSCRIPTION FACTOR 1 261 - -
Mtr7g2337 264 CDD ZnF_GATA 189 236 IPR000679 GO:0006355|GO:0043565
Mtr7g2337 264 ProSiteProfiles GATA-type zinc finger domain profile. 184 220 IPR000679 GO:0006355|GO:0043565
Mtr7g2337 264 MobiDBLite consensus disorder prediction 71 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2337 Mtr-Chr7 39838721 39839968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2337 45 252 C2C2-Gata Transcription Factor Family AT4G32890 43.458 4.76e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mtr7g2337 GATA 1.8e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2337 - - gmx:100786479 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2337 7 39838721 39839968 Mtr7g2337 7 39838721 39839968 ECH
Mtr7g2337 7 39838721 39839968 Mtr6g0841 6 10725589 10727417 PCT