Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2332 ATGGAAGAACCAATTGTTGTTAACAAAGGTGAAGATCAAACTCTTGATCTTCCTCCAGGTTTCAGATTCCATCCAACAGATGCTGAGATAATTGTTTGTTATCTCACTGAAAAGGTTAAAAATAGCAAATTCAGTGCAACTGCTATTGGTGAAGCTGATTTGAACAAGTGTGAACCTTGGGACTTACCAAAGAAAGCAAAGATGGGAGAGAAAGAATGGTACTTTTTTTGTCAGAAAGATAGAAAATATCCAACAGGTATGAGAACAAATAGAGCAACTGAATCTGGTTACTGGAAAGCTACAGGAAAAGACAAAGAGATTTATCACAAAGGAAAAGGAATCCAAAACCTTGTTGGTATGAAGAAGACTCTTGTGTTCTATAAAGGAAGAGCTCCAAAAGGAGAGAAGACTAATTGGGTTATGCATGAATTCAGATTGGAAGGCAAATTTGCAACTCACAATCTTCCCAACAAAGAAAAGGATGAATGGGTTGTGTCAAGGGTTTTTCACAAGAACACAGATGTTAAAAAACCTCAAATTTCTTCTGGTCTTTTAAGGATAAACTCAATTGGTCATGATGATCTTCTTGATTATTCTTCACTTCCACCTCTCATGGATCCTTCTTACACAAATGATGATTTCAAAGGAATTACCACAAATCAACAAATTTCATCAACTAAATCACAATCAGATGGATATTATCTTCCAAGCTTCTCCATCAACAATAATCAACATCAATTTCTCATCAAGCCAGAAGATAATTACCATAGAATCAACTATGATCAACATGAGATTAATCCAACCATGATGAACTACACTTCCATTTCCAACCAATCCAATCTCAACAACCCAATTGGAAACACTTTACCACAACCTCAAATCCGAATCCAAAATCCAAACTTGAACTACTTTATGTATCAAAATAGGATGCAAAGTTCCATGCCAACAAATGTTTATGGCTCAGGTAAGAATAATGAGTGCAAGGTGGAACAATTCTCTTCAAACCAATCACAAGATACAGGTCTCAGCAATGACACTTCATCGGCTGTATCGAAACTAGACATGGAAAGGAATAGGGCATTGTATGATGATCTTGAAGGTCCTTCATCAGTTGCACCTCTCTCAGATTTGGATAGTTTTTGGGACTATTGA 1152 0.3637 MEEPIVVNKGEDQTLDLPPGFRFHPTDAEIIVCYLTEKVKNSKFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYHKGKGIQNLVGMKKTLVFYKGRAPKGEKTNWVMHEFRLEGKFATHNLPNKEKDEWVVSRVFHKNTDVKKPQISSGLLRINSIGHDDLLDYSSLPPLMDPSYTNDDFKGITTNQQISSTKSQSDGYYLPSFSINNNQHQFLIKPEDNYHRINYDQHEINPTMMNYTSISNQSNLNNPIGNTLPQPQIRIQNPNLNYFMYQNRMQSSMPTNVYGSGKNNECKVEQFSSNQSQDTGLSNDTSSAVSKLDMERNRALYDDLEGPSSVAPLSDLDSFWDY* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2332 383 ProSiteProfiles NAC domain profile. 17 171 IPR003441 GO:0003677|GO:0006355
Mtr7g2332 383 SUPERFAMILY NAC domain 15 172 IPR036093 GO:0003677|GO:0006355
Mtr7g2332 383 Gene3D NAC domain 26 176 IPR036093 GO:0003677|GO:0006355
Mtr7g2332 383 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 342 - -
Mtr7g2332 383 MobiDBLite consensus disorder prediction 331 350 - -
Mtr7g2332 383 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 7 342 - -
Mtr7g2332 383 Pfam No apical meristem (NAM) protein 18 146 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2332 Mtr-Chr7 39754102 39756247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2332 1 209 NAC Transcription Factor Family AT5G18270 70.233 2.07e-107 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g2332 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2332 - - aprc:113861501 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2332 7 39754102 39756247 Mtr7g2332 7 39754102 39756247 ECH