Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2330 ATGGGAACCCCACAGACCAATTTGCCACCAGGTTTTAGGTTCCACCCTACTGATGCAGAACTCATTCTTCACTACCTTAGGAAAAAAATTGCCTCCATTCCCTTGCCTGTTTCCATCATTGCTGAAGTTGATATTTATAAGTTGGATCCTTGGGATTTACCAGCTAAGGCTTCATTTGGTGAGAAAGAATGGTACTTTTTTAGTCCTAGAGATAGAAAGTACCCAAACGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAAGCCACTGGCACTGATAAGACCATAGTGGCATCATTGCCATGTGGAGGAGGAAGATCACAAGAGAACATTATTGGTGTCAAAAAGGCTCTTGTTTTTTACAAAGGAAAACCCCCAAAGGGTATTAAGACTAATTGGATCATGCATGAATATCGTCTTGTTGACAACAATAAACCTATTAAGCTCAAAGATTCTTCCATGAGGTTGGATGATTGGGTGCTATGCCGAATTTACAAGAAATCAAAATGTGCACTAACTTCAACAGAATCATCAGAAACTATGGTAGGTGAAGTGGAACATGCAGAAGAGACACAATTCCAAGAAACCCTATTTCCAATCACCAAAAACACAACCTCACCTCTTCAAAACACACTCATGTCTCAAAAATCAGTGTCCTTTTCAAACCTATTAGATGCTATGGACTACTCCATGTTAAGCAGCTTCTTATCTGAAAATTCCAACAACCCATCAGGAATTGGAACAAGTTCAGGTTTCAACACTGAAAATTTTAACCAACAACAATCTTCCCATATCAACACTTGCAACAATTACATGTCTCAGAAGAATCCTCAATCCAACACTTTAAAGCACCAGCTTTCAAACGTAGATGAAGACATGTTATACCCATCAAAGAAGTACTTGAGTTCCTCTTGCAATTTTCCTAACATCAATTCTCAGTATGAAAACTACCTTATGAAGCAATCTTTGATGAATCAACAATTGCTTTTAGGTCCTCATCATCAATATCAAGGCTAA 1023 0.39 MGTPQTNLPPGFRFHPTDAELILHYLRKKIASIPLPVSIIAEVDIYKLDPWDLPAKASFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPCGGGRSQENIIGVKKALVFYKGKPPKGIKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKCALTSTESSETMVGEVEHAEETQFQETLFPITKNTTSPLQNTLMSQKSVSFSNLLDAMDYSMLSSFLSENSNNPSGIGTSSGFNTENFNQQQSSHINTCNNYMSQKNPQSNTLKHQLSNVDEDMLYPSKKYLSSSCNFPNINSQYENYLMKQSLMNQQLLLGPHHQYQG* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2330 340 Pfam No apical meristem (NAM) protein 9 142 IPR003441 GO:0003677|GO:0006355
Mtr7g2330 340 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Mtr7g2330 340 PANTHER NAC TRANSCRIPTION FACTOR 56 6 297 - -
Mtr7g2330 340 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Mtr7g2330 340 ProSiteProfiles NAC domain profile. 8 169 IPR003441 GO:0003677|GO:0006355
Mtr7g2330 340 PANTHER OS01G0104200 PROTEIN 6 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2330 Mtr-Chr7 39730567 39732484 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2330 4 340 NAC Transcription Factor Family AT3G04070 52.542 6.70e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g2330 NAM 3.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2330 - - vun:114194335 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2330 7 39730567 39732484 Mtr7g2330 7 39730567 39732484 ECH