Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2323 ATGGTGGTGGGTGCTGTAAAAGCAGCAGTAGGAGACTTAGTATTAACATTCATGTGGGTTTTTTGTTCATCCATGTTAGGTATAGTTTCAAGTGCTATAACCAAAGCCCTCGATCTTCAAAACGTTTCATACAATGGTTTCCCTTACCCTTCTTTGATTGTAACAACTACCCTTGTTTTTCTTCTTGTTTTCTTGTTTACCATGATTGGTAATGCAATGGGTGGTGCTAGCTTTAACCCTACTGGTACTGCTGCGTTTTACTCTGTTGGCCTTGGTTCTGATACCCTTTTCTCTATGGCTCTTCGTTTCCCTGCTCAGGCACTCGGTGCTGCGGGTGGTGCAATGGCAATTGCGGAGTTGATTCATCCGAAATACAAACACATGATCAGGGGTCCTTCTTTGAAAGTGGACTTGCATACCGGGGCTGCTGCTGAATTGGTTTTGACATTTGTGATTACTTTTGCTGTTCTCTGCATATTCCTCAAGGGACCTCGTAATGATTTAATGAAGATTTGGTTGCTGGCCATGTCAACTGTCACTTTGGTCATGGTTGGCTCTGCTTACACTGGTCCATCCATGAACCCAGCCAATGCCTTTGGTTGGGCATACTTAAACAACTGGCACAACACATGGGACCAATTCTATGTATACTGGATTTGCCCCTTCACTGGAGCAATATTGGCTGCTTGGCTATTTAAAGCTATCTTCCCCCCACCAGAAGTTAAACAGAAAAAAGCATGA 741 0.4372 MVVGAVKAAVGDLVLTFMWVFCSSMLGIVSSAITKALDLQNVSYNGFPYPSLIVTTTLVFLLVFLFTMIGNAMGGASFNPTGTAAFYSVGLGSDTLFSMALRFPAQALGAAGGAMAIAELIHPKYKHMIRGPSLKVDLHTGAAAELVLTFVITFAVLCIFLKGPRNDLMKIWLLAMSTVTLVMVGSAYTGPSMNPANAFGWAYLNNWHNTWDQFYVYWICPFTGAILAAWLFKAIFPPPEVKQKKA* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2323 246 Pfam Major intrinsic protein 5 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr7g2323 246 PANTHER AQUAPORIN SIP1-1 4 246 - -
Mtr7g2323 246 Gene3D Glycerol uptake facilitator protein. 4 245 IPR023271 -
Mtr7g2323 246 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr7g2323 246 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr7g2323 246 PRINTS Major intrinsic protein family signature 98 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr7g2323 246 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr7g2323 246 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr7g2323 246 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr7g2323 246 SUPERFAMILY Aquaporin-like 5 239 IPR023271 -
Mtr7g2323 246 PANTHER AQUAPORIN SIP1-1 4 246 IPR044222 GO:0015250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2323 Mtr-Chr7 39651126 39656091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2323 5 245 Major Intrinsic Protein MIP AT5G18290 54.959 1.67e-80 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2323 K09875 - gmx:102669186 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2323 7 39651126 39656091 Mtr7g2323 7 39651126 39656091 ECH