Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2298 ATGAGCTTTCAAGATATTCAACATGGCTCCAATCCTCCTTCTCGTCGAACTCAGTCCCCGTCACAAGCCGTCGCTGCCGGAATTTTTCAGATCAATACCGCCGTTGCTACTTTCCGACGACTCGTTGATTCCGTTGGAACTGTTAAAGATACTCCAGAACATCGTCAGAAACTGCATAATACAAGACAGAGGATATCGCAGCTTGTGAAGGATACTTCTGCTAAGCTTAAATCTTTGTCTGAATCTAATCGGGATTCTAATGCCAATGCAAATAAGAAAATTGAAGATGCTAAGTTGGCAAGAGATTTCCAAACCACATTGCAAGAATTTCAGAAAGTTCAACAGCTTGCTTCTGAGCGTGAATCAGCTTATACTCCTGCTGCCCCTGCTTCTTCTTTACCAACAAGCTCTGGCCCTGGTGAACAATCAATTGAGATAGACCCCGAAAGCCAACCTTTGGTCAGAGGGCAGATGAGGCAAGAGTTACATCTACTGGATAATGAAATATCCTTCAATGAGGCCATGATTGAAGAAAGAGATCAAGGTCTTAGAGAGATAGAAGAGCAAATTGGAGAAGCAAATGAAATATTCAAGGACCTTGCTGTTTTGGTTCATGATCAGGGGATTGTTATTGATGACATTCAATCAAATATAGATACTTCTGCTGGTGCAACAGTTCAAACTAAGGCCCAGCTAGCCAAAGCTAACAAAAGTGTGAAATCCAAAAATAAATGGTGTTGGTGGGTGCTTTTAATTTTTGTGGCTGTGCTGGTCATCTTCCTCATTGTACTCCTTATTTAG 801 0.417 MSFQDIQHGSNPPSRRTQSPSQAVAAGIFQINTAVATFRRLVDSVGTVKDTPEHRQKLHNTRQRISQLVKDTSAKLKSLSESNRDSNANANKKIEDAKLARDFQTTLQEFQKVQQLASERESAYTPAAPASSLPTSSGPGEQSIEIDPESQPLVRGQMRQELHLLDNEISFNEAMIEERDQGLREIEEQIGEANEIFKDLAVLVHDQGIVIDDIQSNIDTSAGATVQTKAQLAKANKSVKSKNKWCWWVLLIFVAVLVIFLIVLLI* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2298 266 SMART SynN_4 8 122 IPR006011 GO:0016020
Mtr7g2298 266 MobiDBLite consensus disorder prediction 128 144 - -
Mtr7g2298 266 Pfam SNARE domain 210 261 IPR000727 -
Mtr7g2298 266 MobiDBLite consensus disorder prediction 117 146 - -
Mtr7g2298 266 SUPERFAMILY t-snare proteins 19 222 IPR010989 GO:0016020|GO:0016192
Mtr7g2298 266 CDD SNARE_Qa 176 234 - -
Mtr7g2298 266 Gene3D - 9 132 - -
Mtr7g2298 266 Gene3D - 167 266 - -
Mtr7g2298 266 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Mtr7g2298 266 PANTHER SYNTAXIN 14 265 IPR045242 -
Mtr7g2298 266 SMART tSNARE_6 168 235 IPR000727 -
Mtr7g2298 266 PANTHER SYNTAXIN-22-LIKE 14 265 - -
Mtr7g2298 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Mtr7g2298 266 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2298 Mtr-Chr7 39402727 39405665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2298 1 253 SNARE and Associated Proteins AT5G46860 57.977 8.09e-99 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2298 - K08488 gsj:114389394 397.127