Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2279 ATGGTGGCTCAATCGTTGGAGATTCGCGATTCCGTTGCGAATGATTGTGTTGTTCCGAAGCTTTTGAAGGTTTCAATGACTCCTAAGGTGAAGATTAAGGTGAAATACGGTGGAAAGAAGCTGAGAGATGAATCTAAGGATGCTACGACGACGGAGGTGACACCAATGTCGTTGCAACGGAGATCGAGTTCGAGGATTCAAGCTAAGCAGAAAGAGGTTGAAGAGATTCAGCTTCGCCGGAAAGCTGAGGGGGTAGAAGCTGAAGAGAAATCCGACGAGGTTGAGGTTTCACCGGTGAAGTCGAGGAAGCGTGTGAGGAGAAGTCCTAGTAGGGAGAGTGTGGTTAAGGAGGTTGTTGAGGAGAAAGAGACGACGGAGAAGAAGAAGGAAGATGTTGTTGTTGAGGGAAAACCGACGAAGAAGAGGAAATCTGCGTCGGATGAAAAACGTGAGCTGATGGAGGTTTGGAATGAGAAAATGGCTGCTGAAACTGAAAATGCTGGCGGTGCATTGAGTGATAAGAGCTCAACGGCGAAGGTGAAGGAGACTATTAGGACTTTTAACAAGCACTATCTTCATTTGGTTCAGGAGGAGGAGGCGAGGGTTGCTAAAGATAACGCTGAAATTGAGAAGAGAGGTGGTGGAAAGAAATCTGCTTCTAAAAAGAAATCTCCTAAAAAATCTCCTGAGAAGAAATCTCCTAAAAAATCTCCTGGGAAGAAGTCCACTAAGAAAGATGCAGAACCTAAAGAAAAACAACACTCTGCCAAGCGACCTGATCTGAAAGCCATAACCAAGATGATGCAAAATAAGGAGATACTGTACCCTGACAAAAGAATTGGCAGCATTCCAGGCATTGAGGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCACTGGTTAAATGGCATTGATTTTATCGGCCAATCTTATTCCAAAACGTACCCCAAGCTCAAACTCCCAGTTGCTGTGGCAATTGTTATTTCAGGCATGTATGAAGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATTTGACCGGTAATAAGCGTCAAATTCAAGATCAAAAGTTGGAGCGGGGTAATTTAGCACTCAAGAACTGCTGGGATCAAAAGGTGCCAGTAAGGGTGATTCGAGGTCATGACTCACGTAGCAGTTACACTCGTAAAGTCTATACATATGATGGCTTGTACAAGGTTGACCGCTATTGGGCAGAGAAGGGAATATCTGGCTTCACAGTATACAAGTTTCGTCTCAGGAGGGTTGAAGGACAGCCTACTTTAACAACAAATCAGGTTTATTTCACAATGGGACGTGTACCTCAGTCTACAGCAGAAATACGAGGGTTGATATGTGATGATATCACTAACGGTCAGGAAGCTGTGCCCATTCCAGCTACAAATTTGGTTGATGACCCACCTGTTCCGCCGCCCCCAGGTTTCACATATTTGAAGTCTCTGAAGGTTGCAAAAGGCGTAAAAATTCCTGAGAGCGCCTCTGGATGCAAATGCAAAGACAAATGTACTGATCCAAACACCTGTGAATGTGCAAAGCGCAATGGCTCTGAATTTCCCTATGTATCTAAAGATGGTGGCAGATTAATTGAAGCTAAAGACGTTGTGTTTGAATGTGGTCCCAATTGTGGCTGTGGTCCTGAGTGTGTGAATAGGACTTCTCAAAGAGGACTTCACTATCGTCTGGAGGTTTTCCGTACTGCAAAGAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGTGCACCGGTTTGTGAGTACACTGGAATACTTGGTAGGACTGAAGACGTAGACAGTGTATTGGAAAACAACTATATTTTTGAGATAGATTGCTTGCAAACAATCAAGGGGCTTGGTCAAAGGGAGAGGCGGTCAAAAAATGTAGCATATGCTTCAAGTTTGCTGGAAAAATACGATGACCAAGATTCTGAAAGTGCACCAGAGTTTTGCATTGATGCAGGGTCTACTGGAAATGTTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATTTGTTTGTACAATGTGTTTTGAGCACACACCATGATTTGCGATTGGCTCGAGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGAGCTGACATATGACTATGGCTATGCGCTTGATAGCGTCCTGGACTCTGATGGGAAGGTAAAGCAAATGGCGTGCTATTGTGGAGCTACAGGCTGCAGGAAGCGATTATTCTAA 2274 0.4433 MVAQSLEIRDSVANDCVVPKLLKVSMTPKVKIKVKYGGKKLRDESKDATTTEVTPMSLQRRSSSRIQAKQKEVEEIQLRRKAEGVEAEEKSDEVEVSPVKSRKRVRRSPSRESVVKEVVEEKETTEKKKEDVVVEGKPTKKRKSASDEKRELMEVWNEKMAAETENAGGALSDKSSTAKVKETIRTFNKHYLHLVQEEEARVAKDNAEIEKRGGGKKSASKKKSPKKSPEKKSPKKSPGKKSTKKDAEPKEKQHSAKRPDLKAITKMMQNKEILYPDKRIGSIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDFIGQSYSKTYPKLKLPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGNKRQIQDQKLERGNLALKNCWDQKVPVRVIRGHDSRSSYTRKVYTYDGLYKVDRYWAEKGISGFTVYKFRLRRVEGQPTLTTNQVYFTMGRVPQSTAEIRGLICDDITNGQEAVPIPATNLVDDPPVPPPPGFTYLKSLKVAKGVKIPESASGCKCKDKCTDPNTCECAKRNGSEFPYVSKDGGRLIEAKDVVFECGPNCGCGPECVNRTSQRGLHYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILGRTEDVDSVLENNYIFEIDCLQTIKGLGQRERRSKNVAYASSLLEKYDDQDSESAPEFCIDAGSTGNVARFINHCCEPNLFVQCVLSTHHDLRLARVVLFAADNIPPLQELTYDYGYALDSVLDSDGKVKQMACYCGATGCRKRLF* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2279 757 ProSiteProfiles SET domain profile. 578 727 IPR001214 GO:0005515
Mtr7g2279 757 SUPERFAMILY PUA domain-like 263 454 IPR015947 -
Mtr7g2279 757 SMART preset_2 465 562 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr7g2279 757 SUPERFAMILY SET domain 461 733 IPR046341 -
Mtr7g2279 757 MobiDBLite consensus disorder prediction 216 230 - -
Mtr7g2279 757 ProSiteProfiles Post-SET domain profile. 741 757 IPR003616 -
Mtr7g2279 757 SMART set_7 578 733 IPR001214 GO:0005515
Mtr7g2279 757 MobiDBLite consensus disorder prediction 50 64 - -
Mtr7g2279 757 MobiDBLite consensus disorder prediction 231 263 - -
Mtr7g2279 757 MobiDBLite consensus disorder prediction 65 158 - -
Mtr7g2279 757 Pfam Pre-SET motif 468 570 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr7g2279 757 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 59 756 - -
Mtr7g2279 757 Coils Coil 68 88 - -
Mtr7g2279 757 MobiDBLite consensus disorder prediction 42 178 - -
Mtr7g2279 757 ProSiteProfiles Pre-SET domain profile. 513 575 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr7g2279 757 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 94 757 IPR025794 GO:0016571
Mtr7g2279 757 ProSiteProfiles YDG domain profile. 281 434 IPR003105 -
Mtr7g2279 757 Pfam SET domain 589 727 IPR001214 GO:0005515
Mtr7g2279 757 SMART G9a_1 276 438 IPR003105 -
Mtr7g2279 757 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 59 756 - -
Mtr7g2279 757 Gene3D SET domain 458 757 IPR046341 -
Mtr7g2279 757 MobiDBLite consensus disorder prediction 203 263 - -
Mtr7g2279 757 Pfam SAD/SRA domain 280 438 IPR003105 -
Mtr7g2279 757 Gene3D - 263 452 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2279 Mtr-Chr7 39181594 39190250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2279 267 757 EF-hand Containing Proteins AT5G13960 67.617 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr7g2279 SAD_SRA 4.7e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2279 K11420 - gmx:100796701 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2279 7 39181594 39190250 Mtr7g2279 7 39181594 39190250 ECH