Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2274 ATGTCCATCTTGCCCTCACAAACCCAATCGTCATCTTCATCTTCTCAAAATTCGACAATCCCTAACCCTAATTTACAACATGGAATTTCAGATTCTCTTTCCCCTTTACTCCACCACTCTCTCGGATCTCTCCAGATCCACGATCTTCCAGGTCCATCAAATCCTGCTGCAGAAAATTCTGGTGTGCCCTCCGAAAAGGTGACGGAATTAGAGTCTTCAAGTGGTATGAAGACACCTCAGCGAAACTCTAGAACACAATCTAGGAGTCACTCAGGAAGACGGACAGTTGGATCTTCCCAATATGAGGGGAAGACAACAGGAACAGTTTCTTCTCATAGAAACCAACAGACTACCGGGTCTGTATATTCTCAAGGAAGCACCCCATTGGCAGGAAGGAAGTCTCAAATGGCAAATGCCAATCACTTGCTCAATTTTCAGTATGATCCAATATCCCGTTCTCAACAAAGGGGTCCTCCTCCTCCCCCTCCAGCAAGGAGGCAGAGGAAGACAAGACCATACAACAAAGATTTGTTTTTGCAGGCCAATTTCAAATTCATGGTGCTAGATTCTGGAAATTATTCACCGGACTCAATGGATCCAGATAAAATGTTGCAGTGGGAAGATATTATATGCGTGACATATTCGACCCCCTTTCCAGTTCAGTGTCCAATTTGTTTGGAGCATCCCCTGTGTCCCCAAATAACCTCATGTGGACACATTTTCTGTTTTCCATGTATACTACAATACTTGATGTTGGGTGAAGAGGATCACAAAGGTGATCGCTGGAAAAGGTGTCCGTTGTGCTTTGTGACAATATCTGTCAAGGATTTATATACACTCCACATCACAAATGTCAAACAGTATCAAGTAGGAGATAATATTGAGTTCACTTTCTTAACAAGGAAGAAGGATTCATTTACTCTTTCGCATAAAAATAAACAAGAGGGTGATAATTCATCATGTGGCCGAGGCGATGTATGTGACCCCTTTTCTAAGTTCACACTCACGTCAGATGTAGATCTCTCAGTGAGACATGCAATATCAGATCTAGACGGTTGGCTGGCCAGAGCTGATTCAGGTCTTGTTGACGACATGGAGAAGCTTCCATATGTTAGTGCTGCAATGCAGCAGTTAAAGCAGAGAAAAAAGTACTGGAATGAGCACAAGGCTTGTTATAGTGAAAAATCTTCCAACCTCATTGATTATGCACCCCAGACCCCATCAATATCTACAAATGCTTGGGATAGTGATGACGAAAGCTGTTCTAATGGATCAAGAACTTCCTCCACTGATTTCCCCGATCAAAGTAAGGTTGTAATATTGGATAAATCAACTGCTGGAACCTGTCAGGATGATACTTTGGATGTGGACAAGGTACTAGCTGAGAAGGAGATAACTTTGTCTTCTTCATATGAAGAGAAAAATTGTATTCAAGGGCATTCAAATGGCATTGGAGATGCAAAGGAAAATGATTCGTACAATTTCTATCAGGCCGTTGATGGTCAACATCTAATTCTTCATCCTTTGAACACGAAGTGTTTACTGCATCATTATGGTAGCTATGATAAACTTCCTCACAGAATAAGTGGAAGGATTCTACAATTGGAGACAGTTACTCAATCTGAGGCTATGAGGAGGCGGTATCGATTTCTAAGTCATTTTCCGCTAACCACAATATTTCAGCTTTGTGAAGTTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCTTTTATGGATGAAATAAAGAAACGTGCAAACCAGAGGAAGCAAATTGCAAAGAAGGAACAAAAGGAAAAATTGAAGGCCGAAGCTACTGATAATTATGCTCTTTCCATGTCAACCCATTATCAGTTTATTTCTCGTGATGATCCTCCCACGTTCTCCATGGATGACTTTGAAGCTCTGGGAAATTCTGCTTTGTCATCAAGTCCTCCGGTTGTTGGTGAGAGGAAATTGTTCTCAAGTGTTACTAGGCTTGGTTTTGCCGCTGGCCATGATTCTCCATCCTTTCCTACTCAAGAAACTAGCGATCTACATAGTAACAATTCAATTGCTGGTTCTTCTGGTACAGCAGGTTTGAGGAATGGGGAGACACTATCATACTCCAATGTCATATCTAGAGCAGAATCTAATGGAACTTCGAATGCTCCGAAGACAAATGACTTAGGAAAGAAAGGAAAGAAACCAAATCGAGTTCTTCTGTCAACATCTGGTGGCAGGCGTTATTGA 2235 0.4188 MSILPSQTQSSSSSSQNSTIPNPNLQHGISDSLSPLLHHSLGSLQIHDLPGPSNPAAENSGVPSEKVTELESSSGMKTPQRNSRTQSRSHSGRRTVGSSQYEGKTTGTVSSHRNQQTTGSVYSQGSTPLAGRKSQMANANHLLNFQYDPISRSQQRGPPPPPPARRQRKTRPYNKDLFLQANFKFMVLDSGNYSPDSMDPDKMLQWEDIICVTYSTPFPVQCPICLEHPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDRWKRCPLCFVTISVKDLYTLHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQEGDNSSCGRGDVCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDMEKLPYVSAAMQQLKQRKKYWNEHKACYSEKSSNLIDYAPQTPSISTNAWDSDDESCSNGSRTSSTDFPDQSKVVILDKSTAGTCQDDTLDVDKVLAEKEITLSSSYEEKNCIQGHSNGIGDAKENDSYNFYQAVDGQHLILHPLNTKCLLHHYGSYDKLPHRISGRILQLETVTQSEAMRRRYRFLSHFPLTTIFQLCEVDLSEMLPPEALAPFMDEIKKRANQRKQIAKKEQKEKLKAEATDNYALSMSTHYQFISRDDPPTFSMDDFEALGNSALSSSPPVVGERKLFSSVTRLGFAAGHDSPSFPTQETSDLHSNNSIAGSSGTAGLRNGETLSYSNVISRAESNGTSNAPKTNDLGKKGKKPNRVLLSTSGGRRY* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2274 744 MobiDBLite consensus disorder prediction 1 131 - -
Mtr7g2274 744 MobiDBLite consensus disorder prediction 670 722 - -
Mtr7g2274 744 SUPERFAMILY RING/U-box 221 275 - -
Mtr7g2274 744 Coils Coil 580 600 - -
Mtr7g2274 744 MobiDBLite consensus disorder prediction 150 172 - -
Mtr7g2274 744 Pfam Zinc finger, C3HC4 type (RING finger) 222 268 IPR018957 GO:0046872
Mtr7g2274 744 MobiDBLite consensus disorder prediction 57 131 - -
Mtr7g2274 744 MobiDBLite consensus disorder prediction 666 744 - -
Mtr7g2274 744 MobiDBLite consensus disorder prediction 411 431 - -
Mtr7g2274 744 ProSiteProfiles Zinc finger RING-type profile. 222 268 IPR001841 -
Mtr7g2274 744 PANTHER RING FINGER 10 FAMILY MEMBER 78 741 IPR039739 -
Mtr7g2274 744 SMART ring_2 222 268 IPR001841 -
Mtr7g2274 744 CDD RING-HC_RNF10 222 269 - -
Mtr7g2274 744 ProSitePatterns Zinc finger RING-type signature. 237 246 IPR017907 -
Mtr7g2274 744 MobiDBLite consensus disorder prediction 1 39 - -
Mtr7g2274 744 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 301 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2274 131 694 C3H Transcription Factor Family AT3G26730 56.552 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2274 - - gmx:100798764 1084.32