Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2260 ATGATGATGGATGAGGGAGAAGGTAAGAAGAAAGTTGTGGTTCAGAAAACCGAGGCGTGTGGTTTCATGGCAGGTGTTGAAGATGAGCTAGGGTTTGTCAACGTGAAAGGAGACAACAACAACGGGTCGGGTCAACGGATCCATCATGATCATGGTTTTGTTGCTGCTGCATTTGGAACTGTTCATAGGAAGAAAAGGATGGCTAGGCAAAGAAGATCTTCATCTTCTACCATCACTATTCATCTCAAAAATCTTCCTTCTTCTACTACTACTACTACTACTACTACTACCTCGCACGTGCCAATCTCTCCAATTCCACCTCTTTTTCATTCTCTCCCTCCCGCACGTGAAATCGATCATAGGAGGTTGAGATTCCTTTTCCAAAAGGAGTTGAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGGTGTTGCCTAAGAAAGCAGCAGAGGCTTTCCTTCCTGTCCTTGAGTCGAAGGAAGGAATTCTTCTCAGCATGGATGATTTAGATGGTCTTCATGTATGGAGTTTCAAGTACAGGTTTTGGCCTAACAATAACAGTCGGATGTATGTACTTGAAAACACTGGAGACTTTGTTAGCACACATGGTCTACGCTTTGGAGACTCCATTATGGTTTACCAAGATAATCAAAATCACAATTATGTAATTCAGGCAAAGAAAGCTTGTGATCAAGATGAGTATATGGAAGAAGCTAATGATACAATCAATCATATCTTCGTCGATGATTATGAGGTGAACAAAAGTTGCTTTGATGTAGCTTATCCTGCAATGAATGATACAAGCATGTCATTTATATATGACACAACCATCTCAAATGATTCACCACTTGATTTTTTGGGTGGATCAATGACAAACTACTCAAGAATTGGATCAGTTGAAACATTTGGCTCTGTTGAGAATCTGTCACTTGATGACTTCTATTGA 945 0.4042 MMMDEGEGKKKVVVQKTEACGFMAGVEDELGFVNVKGDNNNGSGQRIHHDHGFVAAAFGTVHRKKRMARQRRSSSSTITIHLKNLPSSTTTTTTTTTSHVPISPIPPLFHSLPPAREIDHRRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPVLESKEGILLSMDDLDGLHVWSFKYRFWPNNNSRMYVLENTGDFVSTHGLRFGDSIMVYQDNQNHNYVIQAKKACDQDEYMEEANDTINHIFVDDYEVNKSCFDVAYPAMNDTSMSFIYDTTISNDSPLDFLGGSMTNYSRIGSVETFGSVENLSLDDFY* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2260 314 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Mtr7g2260 314 Pfam B3 DNA binding domain 127 224 IPR003340 GO:0003677
Mtr7g2260 314 SUPERFAMILY DNA-binding pseudobarrel domain 125 228 IPR015300 -
Mtr7g2260 314 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 54 314 - -
Mtr7g2260 314 CDD B3_DNA 125 227 IPR003340 GO:0003677
Mtr7g2260 314 MobiDBLite consensus disorder prediction 65 102 - -
Mtr7g2260 314 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 54 314 IPR044800 GO:0003700
Mtr7g2260 314 SMART B3_2 127 229 IPR003340 GO:0003677
Mtr7g2260 314 MobiDBLite consensus disorder prediction 72 102 - -
Mtr7g2260 314 Gene3D - 123 243 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2260 Mtr-Chr7 38986974 38991190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2260 1 314 B3 DNA Binding Superfamily AT3G26790 46.610 3.40e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mtr7g2260 B3 2.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2260 - - gmx:100783961 423.705