Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2247 ATGGGTCGTTGCCCATGTTTTGGGTCTAGAAAGAAGGGAAAAGGGAAGAATGATCAGGAAGATGAAAAGAACCTTAAATCTGTTGGGAGTACTGTTTCTGTTTCTGGAAGATCTTTAGAACGGAGATCAGAAGCTACTACAGCAGAGAATACCGACATTTCTAATAAAGCTCAAATATTTACCTTCAGAGAACTTGCGACGGCAACAAAAAACTTTAGGGATGAAACCTTTATTGGGCAAGGTGGATTTGGAACTGTTTACAAAGGAAAGCTAGGTAGCACTGGTCAGGCTGTAGCTGTTAAAAGACTTGATACAACTGGTTTCCAAGGTGAGAAAGAATTTTTAGTGGAGGTTCTCATGCTCTCTCTTCTACACCATCCCAACCTTGTTAGTATGATTGGTTACTGCGCGGAAGGTGATCAACGACTTCTTGTCTATGAATACATGCCTATGGGATCCTTAGAATCTCATCTCCATGATCTTTTGCCGGATAATGAACCGCTTGATTGGAATACGAGAATGAGGATAGCTGTAGGGGCAGCAAGAGGACTAAATTATCTTCACCATGAAGCGGAGCCTTCTGTTATATATAGAGATTTGAAATCATCCAACATATTATTGGATGAAGGATTCTATCCAAAGCTTTCTGATTTCGGCCTTGCGAAATTCGGTCCAACTGGAGATCAATCATATGTTGCTACTAGAGTCATGGGAACACATGGTTATTGTGCACCTGAGTATGCAACTACTGGAAAATTAACAATGAGATCTGACATCTATAGTTTTGGAGTTGTGTTATTGGAGCTAATTACTGGACGTAGAGCGTATGATGAAACTCGTGCCCATGACAAGCATCTTGTTGATTGGGCACGCCCATTGTTCAGAGACAAAGGGAATTTTCGAAAATTGGTAGATCCACATTTGCAAGGTCACTACCCTATATCAGGTCTAAGGATGGCCCTTGAAATGGCACGCATGTGTCTTCGAGAAGATCCACGTCTCCGGCCTTCTGCAGGCGATATAGTACTTGCCCTAGATTACTTGTCATCCAAGAAATATGTCCCAAAAGCATCCGAAATAGTTAGCCCAGGAGAGATGGAGCACGACGAATCCCCCAATGAAACAACGATGATTTTGGTTAAAGATTCACTAAGAGAGCAAGCTCTTGCAGAGGCCAAACAATGGGGGGAGACATGGAGAGAAAAGAGAAAACAAAGTGGCCAAAATAGTCCTGAGGAAATAATAAGGAGGTAA 1254 0.4211 MGRCPCFGSRKKGKGKNDQEDEKNLKSVGSTVSVSGRSLERRSEATTAENTDISNKAQIFTFRELATATKNFRDETFIGQGGFGTVYKGKLGSTGQAVAVKRLDTTGFQGEKEFLVEVLMLSLLHHPNLVSMIGYCAEGDQRLLVYEYMPMGSLESHLHDLLPDNEPLDWNTRMRIAVGAARGLNYLHHEAEPSVIYRDLKSSNILLDEGFYPKLSDFGLAKFGPTGDQSYVATRVMGTHGYCAPEYATTGKLTMRSDIYSFGVVLLELITGRRAYDETRAHDKHLVDWARPLFRDKGNFRKLVDPHLQGHYPISGLRMALEMARMCLREDPRLRPSAGDIVLALDYLSSKKYVPKASEIVSPGEMEHDESPNETTMILVKDSLREQALAEAKQWGETWREKRKQSGQNSPEEIIRR* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2247 417 Gene3D Phosphorylase Kinase; domain 1 32 148 - -
Mtr7g2247 417 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Mtr7g2247 417 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2247 417 SMART serkin_6 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2247 417 MobiDBLite consensus disorder prediction 1 50 - -
Mtr7g2247 417 Pfam Protein kinase domain 73 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2247 417 PANTHER OS07G0668900 PROTEIN 10 365 - -
Mtr7g2247 417 MobiDBLite consensus disorder prediction 11 25 - -
Mtr7g2247 417 MobiDBLite consensus disorder prediction 26 41 - -
Mtr7g2247 417 MobiDBLite consensus disorder prediction 395 417 - -
Mtr7g2247 417 Gene3D Transferase(Phosphotransferase) domain 1 149 362 - -
Mtr7g2247 417 CDD STKc_IRAK 78 342 - -
Mtr7g2247 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Mtr7g2247 417 MobiDBLite consensus disorder prediction 392 417 - -
Mtr7g2247 417 PANTHER OS07G0668900 PROTEIN 10 365 - -
Mtr7g2247 417 SUPERFAMILY Protein kinase-like (PK-like) 53 345 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2247 Mtr-Chr7 38883086 38887024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2247 49 400 Glycoside Hydrolase AT3G07070 58.774 1.93e-144 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr7g2247 Pkinase 4.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2247 K13430 - gmx:100809298 571.237