Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2244 ATGGCTGTAGCTAATGTTGAGCCTGATCTACCTGCTGGATTCAGGTTTGATCCAACCGATCGTCAACTTGTTGAGTGCTACCTGACGAAGAAAATTCTCAACCAACCTCTTCCAACTCACTTGTTTGAATTTGATGTATTTCAAACTGAGCCATGGAGGCTGCCACGAGAAAATAGGTACTCTTTGGAGCATAGGAAGTACTATTTCTTTGATCTCAGGAACCGTAGGTTCCAAAATATGGATGCAACACCAGCTGGAAATGGTGAATGGAGAATGGTTGAATGGAACGAAGAGTTTGCTCTTTCAAACAATCAATTGATTGTGAGAAAGAACACATATGTTTACTGGAGAGTGCAAGGAAGCCAAGCTGTGATGACACAATGGTGGATGCATGAATTTGTCATAAGTACAATTTTTCATCCAATTAGGGTGTCACCTATAGCTGCCTATCGGATATTTAAGATATGA 468 0.4081 MAVANVEPDLPAGFRFDPTDRQLVECYLTKKILNQPLPTHLFEFDVFQTEPWRLPRENRYSLEHRKYYFFDLRNRRFQNMDATPAGNGEWRMVEWNEEFALSNNQLIVRKNTYVYWRVQGSQAVMTQWWMHEFVISTIFHPIRVSPIAAYRIFKI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2244 155 Gene3D NAC domain 19 153 IPR036093 GO:0003677|GO:0006355
Mtr7g2244 155 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 153 - -
Mtr7g2244 155 Pfam No apical meristem (NAM) protein 11 134 IPR003441 GO:0003677|GO:0006355
Mtr7g2244 155 SUPERFAMILY NAC domain 3 138 IPR036093 GO:0003677|GO:0006355
Mtr7g2244 155 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 153 - -
Mtr7g2244 155 ProSiteProfiles NAC domain profile. 10 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2244 Mtr-Chr7 38834050 38835443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2244 10 145 NAC Transcription Factor Family AT3G04070 31.944 2.11e-20 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g2244 NAM 2.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2244 - - mtr:MTR_7g083360 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2244 7 38834050 38835443 Mtr6g0849 6 10793956 10796485 PCT