Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2243 ATGGCTGTTGATGAGAAGTATAGTGAGCTAGTTTCGGAAGATGGTATGAAATTACCTGTTGGATTCAGGTTTGATCCAACTGATCATGAGCTTGTAGATTATTATCTGACGAGAAAAGTCTGTAACCAACCTCTTCCAAATCTCTTGTTAGAATTTGATGTATTTCAAACTGAGCCATGGAAGCTGCCAAGAGATAATAGGACCTCTTCAAAGCATATGAGGTACTATTTCTTTGATATCAGGAACCGTAGGTTCGAGAATATGGATGCAAGAAGAGCTGGAAATGGTGAATGGAGAATATATGAGAGGAATGAGGAGTTTGCTCTTTCAAACAATCAATTGATTGGGAGAAAGAACACATTTGTTTACCGGAGAATACAAGGAAATCAAGCTCTGATGACACAATGGAGGATGCATGAATTTGTCATCGGTACAATTTTTCATCAAACTAAGGTATACTCAGCTGTAGGTGCCTATCGGATATTTAAGATGAAGGTGGCAAAAGCTGAGAAGAAGGCCCCACCAACTGTGATTGATTTCACAATGGAGGATGCAAGTGTCTCTGCCCCTCCTCCTTCTCCATGA 585 0.4017 MAVDEKYSELVSEDGMKLPVGFRFDPTDHELVDYYLTRKVCNQPLPNLLLEFDVFQTEPWKLPRDNRTSSKHMRYYFFDIRNRRFENMDARRAGNGEWRIYERNEEFALSNNQLIGRKNTFVYRRIQGNQALMTQWRMHEFVIGTIFHQTKVYSAVGAYRIFKMKVAKAEKKAPPTVIDFTMEDASVSAPPPSP* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2243 194 ProSiteProfiles NAC domain profile. 18 164 IPR003441 GO:0003677|GO:0006355
Mtr7g2243 194 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 164 - -
Mtr7g2243 194 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 18 164 - -
Mtr7g2243 194 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Mtr7g2243 194 SUPERFAMILY NAC domain 12 147 IPR036093 GO:0003677|GO:0006355
Mtr7g2243 194 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2243 Mtr-Chr7 38813221 38814692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2243 9 141 NAC Transcription Factor Family AT5G13180 37.956 1.69e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g2243 NAM 2.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2243 - - mtr:MTR_7g083360 217.624