Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2199 ATGGCATATGTTGATTACCATGAAAATTCCATTGCTACCCCCACCTCTACCAATACCCTAAAGCTTTTTGGCATCAACATCCAAGAAGCTTGTTTGAACCAATCTCCAACACAATCAGAATCATCTGAGCCTTTGAATGGGAGAAAATTATACGAGTGTCAATATTGTTGTAGAGAATTTGCAAATTCACAAGCCTTAGGAGGACACCAAAATGCACACAAGAAAGAGAGGCAACTTTTGAAACGTGCTCAAATGCAAGCAGCTCGTGCCTTTGTTCCTTCACATTTCCATAACAGATTCATCTCATCACCGCAGTGGCTGCCACAACAAAATCATTTCCTCGCCAATGCTCCACCGTCTCAGACACGTTCATCAGCGTGGCTATGCACCACCCATGCAGCAGGTTCGGGAGTTTTTTTAGCTCCCACAGCTGCGTTTGATGGTAGTGCTCCTCGCCATAGTTCTAAATTTGGTGGATTCAACGGTGGTGATTGTAGTGAACAAGGGTTTGGTTTAAATTTGCATCTTGGACTATAA 537 0.4339 MAYVDYHENSIATPTSTNTLKLFGINIQEACLNQSPTQSESSEPLNGRKLYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARAFVPSHFHNRFISSPQWLPQQNHFLANAPPSQTRSSAWLCTTHAAGSGVFLAPTAAFDGSAPRHSSKFGGFNGGDCSEQGFGLNLHLGL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2199 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Mtr7g2199 178 PANTHER ZINC FINGER PROTEIN 5 1 178 IPR044299 GO:0010090
Mtr7g2199 178 SUPERFAMILY beta-beta-alpha zinc fingers 47 78 IPR036236 -
Mtr7g2199 178 Gene3D Classic Zinc Finger 31 99 - -
Mtr7g2199 178 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 178 - -
Mtr7g2199 178 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2199 Mtr-Chr7 38283246 38284056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2199 15 178 C2H2 Transcription Factor Family AT1G67030 42.000 1.72e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2199 - - gmx:100527555 162.155