Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2188 ATGGCTTCAACCACCAAAGACTCAGATTTGGAATATTTGGAACACATTCAACAATACCTTCTTTTTGATGATTCTAGCATGCTGAAATCTCATCAACCTTTTCCAAGCCCTAAAAGTGACAATGATTTAGACACAACTGTAGAGGCGCGTGAAGTAAGCATGCCTCCTGTATGGAAGCGGTACAAGGGAGTGAGGCGTAGGCCATGGGGGAAGTTCGCAGCTGAGATAAGAGATCCAAAAAAGAATGGTGCTAGAGTTTGGCTTGGAACGTATGTGACTGAGGAGGAAGCAGCTTTGGCTTACGACAAAGCTGCTTTTAAGATGCGAGGCCGAAAGGCCAAGCTTAATTTTCCCCACCTCATTGGCTCTGATGTGTCTACATCTGAGCCAGAGAGGGAGGTGGTTTTGAAAAGGGAATCACCCGAGCCTTCTTCTTCTTCATCGGAGGGAAGTTGTGAGTCAGTGTCACCAGGGTTGAAGAGGAGGAGGGGCATGGTTGACCTACTTAACAAATTAGCCAAGAATAGAAGCCAAGTAGCCACGGTGGTTGGCGTTGAAAAGGCCTCACAAGCAAATGATTTTGAGCAGTGGGTGAATGAGTTGAATGATTGCACTCTAATCTAG 624 0.4615 MASTTKDSDLEYLEHIQQYLLFDDSSMLKSHQPFPSPKSDNDLDTTVEAREVSMPPVWKRYKGVRRRPWGKFAAEIRDPKKNGARVWLGTYVTEEEAALAYDKAAFKMRGRKAKLNFPHLIGSDVSTSEPEREVVLKRESPEPSSSSSEGSCESVSPGLKRRRGMVDLLNKLAKNRSQVATVVGVEKASQANDFEQWVNELNDCTLI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2188 207 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Mtr7g2188 207 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Mtr7g2188 207 CDD AP2 59 120 IPR001471 GO:0003700|GO:0006355
Mtr7g2188 207 PANTHER DNA-BINDING DOMAIN 1 179 IPR044808 GO:0003700|GO:0009873
Mtr7g2188 207 Gene3D AP2/ERF domain 59 119 IPR036955 GO:0003700|GO:0006355
Mtr7g2188 207 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
Mtr7g2188 207 MobiDBLite consensus disorder prediction 128 158 - -
Mtr7g2188 207 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mtr7g2188 207 PRINTS Ethylene responsive element binding protein signature 100 120 IPR001471 GO:0003700|GO:0006355
Mtr7g2188 207 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 1 179 - -
Mtr7g2188 207 MobiDBLite consensus disorder prediction 140 154 - -
Mtr7g2188 207 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2188 Mtr-Chr7 38178280 38179305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2188 60 146 AP2-EREBP Transcription Factor Family AT2G44840 73.563 2.22e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g2188 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2188 K09286 - gmx:102663872 247.284