Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2187 ATGGCTTCTACCACCAATGACTCAGATTTTGCCTATTTGGAACATATTCAACAATACCTTCTTTTTGATGATTCCAGCTTTCTAACATCTTATCAACCTTCTCCAAGCCCTAAAAGTGACAATGAGTCAGACACAATTGTAGAGGCGCGTGAAGTAAACACCCCTCCCATATGGAAGCGGTACAAGGGCGTGAGGCGTAGGCCATGGGGGAAGTTCGCGGCAGAGATAAGAGATCCAAAAAAGAATGGTGCTAGGGTTTGGCTTGGTACTTATGTGACTGAGGAGGAAGCAGCTTTGGCTTACGACAAAGCTGCTTTTAAGATGCGTGGCCGAAAGGCCAAGCTTAATTTTCCCCACCTCATTGGCTCTGATGTGTTTACACCAGAGCCAGAGAAGGAGGTGGTTTTGAAACGGGAATCACCGGAGCCTTCTTCATCGGAGGAAAGTTGTGAGTCATCGTCACCAAGGTTAAAGAGGAGGAGGGGCACGGTTGACCTACTTAACAAACTAGCCAAGAATAGATGCCAAGCTAAGGTGGTTGAAATTGAAACGGCATCATCACATGCTAATGATTTTGAGCAATGGGTGAATGAGTTGAGTGATAGCTCTCTAATTTGGTTCTCTTAG 627 0.4561 MASTTNDSDFAYLEHIQQYLLFDDSSFLTSYQPSPSPKSDNESDTIVEAREVNTPPIWKRYKGVRRRPWGKFAAEIRDPKKNGARVWLGTYVTEEEAALAYDKAAFKMRGRKAKLNFPHLIGSDVFTPEPEKEVVLKRESPEPSSSEESCESSSPRLKRRRGTVDLLNKLAKNRCQAKVVEIETASSHANDFEQWVNELSDSSLIWFS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2187 208 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 1 176 - -
Mtr7g2187 208 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Mtr7g2187 208 MobiDBLite consensus disorder prediction 136 158 - -
Mtr7g2187 208 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Mtr7g2187 208 CDD AP2 59 120 IPR001471 GO:0003700|GO:0006355
Mtr7g2187 208 PANTHER DNA-BINDING DOMAIN 1 176 IPR044808 GO:0003700|GO:0009873
Mtr7g2187 208 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
Mtr7g2187 208 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mtr7g2187 208 PRINTS Ethylene responsive element binding protein signature 100 120 IPR001471 GO:0003700|GO:0006355
Mtr7g2187 208 Gene3D AP2/ERF domain 59 119 IPR036955 GO:0003700|GO:0006355
Mtr7g2187 208 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2187 Mtr-Chr7 38174313 38175265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2187 60 148 AP2-EREBP Transcription Factor Family AT2G44840 69.663 7.90e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mtr7g2187 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2187 K09286 - gmx:102663872 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0073 8 859180 860103 Mtr7g2187 7 38174313 38175265 PCT