Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2186 ATGTTGTTTTCTACCACAAAAGACTCAGAGTTTGCATATTTGGAAGATATTCAACAATACCTTCTTCATGATGATTCCAACATTCATACACCACATCAACAAATTCAAAGCCCTAACAATGATTCAAAGACAACTGCATCTAAGCGCGAAGTGAAGGCGCCTCCCACATGGAAGCGTTACAGAGGCGTGAGGCGTAGGCCGTGGGGAAAGTTTGCCGCAGAGATAAGAGACCCAAAAAAGAATGGTGCTAGGGTTTGGCTTGGTACTTATGTGACTGAGGAGGAAGCAGGTTTTGCTTACGATAAAGCTGCTTTCAAGATGCGTGGCCAAAAGGCCAAGCTTAATTTTCCCCACCTCATTGGCTCTGATGTGTACATGTCGGAGTCAAAGAGGAAGGTGGCTTTGAAACGGGAATCACCAGAGCCTTCTTCTTCATCGGAAGATAGTTGTGAGTCATCGTCACCAGGATCGAAGAGGAGGAGCATGGTTGACCTACTTAACAAATTAGCCAAGAATAGAAGCCAAGTCATGGTGGTAGAAAATGAAATGGCCTCACTAGAAAATGATGTTGAGCAATGGGTGAATGAGTTGAGTGATTGCTCCCTAATATGGTGCTCTTAA 621 0.4428 MLFSTTKDSEFAYLEDIQQYLLHDDSNIHTPHQQIQSPNNDSKTTASKREVKAPPTWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYVTEEEAGFAYDKAAFKMRGQKAKLNFPHLIGSDVYMSESKRKVALKRESPEPSSSSEDSCESSSPGSKRRSMVDLLNKLAKNRSQVMVVENEMASLENDVEQWVNELSDCSLIWCS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2186 206 Coils Coil 169 196 - -
Mtr7g2186 206 MobiDBLite consensus disorder prediction 134 161 - -
Mtr7g2186 206 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 3 175 - -
Mtr7g2186 206 MobiDBLite consensus disorder prediction 29 44 - -
Mtr7g2186 206 Gene3D AP2/ERF domain 58 118 IPR036955 GO:0003700|GO:0006355
Mtr7g2186 206 CDD AP2 58 119 IPR001471 GO:0003700|GO:0006355
Mtr7g2186 206 MobiDBLite consensus disorder prediction 145 160 - -
Mtr7g2186 206 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Mtr7g2186 206 PRINTS Ethylene responsive element binding protein signature 99 119 IPR001471 GO:0003700|GO:0006355
Mtr7g2186 206 ProSiteProfiles AP2/ERF domain profile. 59 117 IPR001471 GO:0003700|GO:0006355
Mtr7g2186 206 SMART rav1_2 59 123 IPR001471 GO:0003700|GO:0006355
Mtr7g2186 206 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Mtr7g2186 206 MobiDBLite consensus disorder prediction 29 54 - -
Mtr7g2186 206 SUPERFAMILY DNA-binding domain 59 118 IPR016177 GO:0003677
Mtr7g2186 206 PANTHER DNA-BINDING DOMAIN 3 175 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2186 Mtr-Chr7 38171197 38172051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2186 35 164 AP2-EREBP Transcription Factor Family AT2G44840 56.818 1.14e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g2186 AP2 3.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2186 K09286 - gmx:102663872 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0074 8 865044 865884 Mtr7g2186 7 38171197 38172051 PCT