Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2170 ATGGCAGTATCCACTTTCATTATGATCATGTTCATTATTCTGTTCATGATTTCATGGCCACAAGCTGTAGCTGAAGATAGTGAAGCACAAGCTTTGTTAAAATGGAAACATAGCTTTGACAACCAAAGCCAGTCTCTCTTGTCAACTTGGAAAAATACCACAAATACATGCACAAAATGGAAAGGAATTTTTTGTGACAACTCGAAATCCATTTCTACCATAAACCTTGAAAATTTTGGACTAAAAGGTACACTTCACTCTCTCACTTTTTCTTCATTCTCAAATCTCCAAACACTAAACATTTACAATAACTACTTTTATGGAACCATTCCCCCACAAATTGGTAACATCTCAAAAATAAATACATTGAATTTTTCTCTAAATCCTATTGATGGTTCCATCCCTCAAGAAATGTTCACATTAAAAAGTTTACAAAATATTGATTTTTCCTTTTGTAAACTAAGTGGAGCAATTCCTAATTCCATAGGAAATTTATCCAACCTATTGTATCTAGATTTAGGAGGCAACAATTTCGTTGGCACTCCTATTCCTCCTGAGATTGGAAAATTGAACAAATTATGGTTTCTATCAATTCAAAAATGTAACCTTATTGGTTCTATTCCAAAAGAAATTGGGTTTTTGACAAACCTTACTCTTATTGATTTGTCAAACAACATTCTTTCTGGTGTTATTCCTGAAACCATAGGGAACATGAGCAAATTAAATAAACTCTACCTTGCTAAAAACACCAAGTTGTATGGACCAATTCCTCACTCCTTGTGGAACATGTCTAGCTTGACCTTGATCTACCTTTTTAACATGAGTCTTTCTGGTTCAATCCCTGAATCTGTCGAAAACTTGATTAATGTGAATGAGCTTGCACTTGATCGCAATCGCCTTTCTGGAACCATTCCTTCCACAATTGGAAACTTGAAAAACCTCCAATATTTGTTTTTAGGAATGAATCGTCTGTCAGGATCAATTCCTGCCACTATAGGAAATTTGATCAATTTGGATTCCTTTAGTGTCCAAGAAAACAATCTCACAGGAACTATTCCAACTACAATTGGAAATTTGAATCGGCTCACTGTCTTTGAAGTAGCTGCCAATAAACTTCATGGTAGAATTCCAAATGGACTTTATAACATAACCAATTGGTTTTCCTTTATTGTGTCCAAAAATGATTTTGTTGGCCATTTGCCGTCTCAAATATGCTCTGGTGGATTGTTAACGTTATTAAATGCTGATCACAACCGTTTCACCGGTCCTATACCAACAAGTTTGAAAAACTGTTCTAGCATTGAAAGAATCAGGCTGGAGGTGAATCAAATAGAAGGTGATATAGCACAAGATTTTGGTGTGTATCCAAATTTGCGATACTTTGATGTCAGTGATAATAAACTTCATGGACACATTTCACCAAACTGGGGAAAGAGTCTTAATCTTGATACTTTCCAGATATCCAACAATAATATTTCTGGGGTTATACCATTAGAACTTATTGGTTTAACCAAGCTAGGTAGGCTTCATCTTTCTTCAAATCAATTTACTGGGAAACTTCCAAAAGAATTAGGAGGCATGAAATCATTATTTGATCTCAAGCTTAGTAACAATCATTTTACAGATAGCATCCCAACAGAATTTGGATTGCTACAAAGACTTGAAGTGTTGGATCTCGGAGGAAATGAGTTAAGTGGCATGATACCGAATGAAGTCGCAGAGCTACCAAAGTTACGAATGTTGAATTTGAGCAGAAACAAAATTGAAGGAAGTATTCCTTCTCTGTTTCGTTCATCTCTTGCTTCACTTGATCTTAGTGGAAATCGTTTGAATGGAAAGATACCAGAAATTCTTGGATTCTTGGGTCAGTTGTCAATGTTGAATCTCTCACATAATATGCTTTCAGGCACCATTCCTTCATTTTCTAGTATGAGTTTGGATTTTGTTAACATATCAGACAATCAGTTAGAAGGGCCGCTTCCGGACAATCCAGCTTTTCTTCATGCTCCGTTTGAATCATTCAAAAATAACAAAGACTTGTGTGGAAATTTCAAAGGCTTGGATCCTTGTGGAAGTCGAAAGAGCAAAAATGTCCTCCGATCGGTATTAATTGCTTTAGGAGCTCTAATTTTAGTATTGTTTGGTGTTGGAATTTCGATGTATACTTTGGGTCGAAGAAAAAAATCAAATGAAAAAAACCAAACTGAAGAACAAACACAAAGGGGAGTACTATTTTCCATTTGGAGTCATGATGGGAAAATGATGTTTGAAAATATCATTGAAGCTACTGAGAATTTTGATGACAAATATCTCATTGGAGTTGGAAGTCAAGGAAATGTTTACAAGGCAGAGTTATCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTACATATAATAACAGATGAAGAAATCTCACATTTCAGTTCGAAGTCTTTTATGAGTGAGATTGAAACCTTGTCAGGAATCAGACACAGGAACATCATAAAGCTTCATGGATTTTGCTCACATTCTAAATTCTCATTTTTGGTTTACAAGTTCTTGGAAGGAGGAAGCTTAGGTCAAATGCTAAACAGTGATACACAAGCCACTGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCCAATGCTTTGTCCTACTTGCATCATGATTGTTCTCCTCCTATTGTTCATCGTGATATATCGAGCAAGAATGTCCTTCTTAATCTTGACTATGAAGCTCAAGTCTCCGACTTTGGAACGGCTAAGTTTCTAAAGCCAGGTTTACTTAGTTGGACCCAATTTGCAGGCACTTTTGGGTATGCAGCTCCAGAGTTGGCTCAAACAATGGAGGTGAATGAGAAATGTGATGTATATAGTTTTGGAGTACTTGCTTTGGAAATCATAGTAGGAAAGCATCCTGGAGATCTCATTTCATTATTTTTATCACAATCTACAAGGCTAATGGCTAATAATATGTTGTTGATAGATGTTTTAGATCAAAGACCTCAACATGTTATGAAACCAGTTGATGAGGAGGTTATCTTGATTGCAAGGTTGGCATTTGCTTGCTTGAATCAAAATCCACGTTCTCGACCAACCATGGATCAAGTATCTAAAATGCTTGCAATAGGAAAATCACCTTTGGTGGGAATGCAAATTCACATGATCAGACTTGGGCAACTTAACTAA 3180 0.3613 MAVSTFIMIMFIILFMISWPQAVAEDSEAQALLKWKHSFDNQSQSLLSTWKNTTNTCTKWKGIFCDNSKSISTINLENFGLKGTLHSLTFSSFSNLQTLNIYNNYFYGTIPPQIGNISKINTLNFSLNPIDGSIPQEMFTLKSLQNIDFSFCKLSGAIPNSIGNLSNLLYLDLGGNNFVGTPIPPEIGKLNKLWFLSIQKCNLIGSIPKEIGFLTNLTLIDLSNNILSGVIPETIGNMSKLNKLYLAKNTKLYGPIPHSLWNMSSLTLIYLFNMSLSGSIPESVENLINVNELALDRNRLSGTIPSTIGNLKNLQYLFLGMNRLSGSIPATIGNLINLDSFSVQENNLTGTIPTTIGNLNRLTVFEVAANKLHGRIPNGLYNITNWFSFIVSKNDFVGHLPSQICSGGLLTLLNADHNRFTGPIPTSLKNCSSIERIRLEVNQIEGDIAQDFGVYPNLRYFDVSDNKLHGHISPNWGKSLNLDTFQISNNNISGVIPLELIGLTKLGRLHLSSNQFTGKLPKELGGMKSLFDLKLSNNHFTDSIPTEFGLLQRLEVLDLGGNELSGMIPNEVAELPKLRMLNLSRNKIEGSIPSLFRSSLASLDLSGNRLNGKIPEILGFLGQLSMLNLSHNMLSGTIPSFSSMSLDFVNISDNQLEGPLPDNPAFLHAPFESFKNNKDLCGNFKGLDPCGSRKSKNVLRSVLIALGALILVLFGVGISMYTLGRRKKSNEKNQTEEQTQRGVLFSIWSHDGKMMFENIIEATENFDDKYLIGVGSQGNVYKAELSSGMVVAVKKLHIITDEEISHFSSKSFMSEIETLSGIRHRNIIKLHGFCSHSKFSFLVYKFLEGGSLGQMLNSDTQATAFDWEKRVNVVKGVANALSYLHHDCSPPIVHRDISSKNVLLNLDYEAQVSDFGTAKFLKPGLLSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIVGKHPGDLISLFLSQSTRLMANNMLLIDVLDQRPQHVMKPVDEEVILIARLAFACLNQNPRSRPTMDQVSKMLAIGKSPLVGMQIHMIRLGQLN* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2170 1059 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 170 - -
Mtr7g2170 1059 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 166 240 - -
Mtr7g2170 1059 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 241 1058 - -
Mtr7g2170 1059 Gene3D Ribonuclease Inhibitor 277 384 IPR032675 -
Mtr7g2170 1059 SUPERFAMILY Protein kinase-like (PK-like) 749 1038 IPR011009 -
Mtr7g2170 1059 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Mtr7g2170 1059 ProSitePatterns Tyrosine protein kinases specific active-site signature. 892 904 IPR008266 GO:0004672|GO:0006468
Mtr7g2170 1059 Gene3D Phosphorylase Kinase; domain 1 725 846 - -
Mtr7g2170 1059 SMART LRR_typ_2 503 527 IPR003591 -
Mtr7g2170 1059 SMART LRR_typ_2 575 598 IPR003591 -
Mtr7g2170 1059 SMART LRR_typ_2 551 574 IPR003591 -
Mtr7g2170 1059 SMART LRR_typ_2 214 237 IPR003591 -
Mtr7g2170 1059 SMART LRR_typ_2 621 645 IPR003591 -
Mtr7g2170 1059 SMART LRR_typ_2 165 190 IPR003591 -
Mtr7g2170 1059 SMART LRR_typ_2 311 335 IPR003591 -
Mtr7g2170 1059 Gene3D Ribonuclease Inhibitor 181 276 IPR032675 -
Mtr7g2170 1059 SUPERFAMILY RNI-like 74 382 - -
Mtr7g2170 1059 Pfam Leucine rich repeat 216 273 IPR001611 GO:0005515
Mtr7g2170 1059 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Mtr7g2170 1059 Pfam Leucine rich repeat 548 588 IPR001611 GO:0005515
Mtr7g2170 1059 Pfam Leucine rich repeat 481 540 IPR001611 GO:0005515
Mtr7g2170 1059 SMART serkin_6 766 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2170 1059 Gene3D Ribonuclease Inhibitor 388 692 IPR032675 -
Mtr7g2170 1059 Gene3D Transferase(Phosphotransferase) domain 1 847 1044 - -
Mtr7g2170 1059 Pfam Protein kinase domain 768 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2170 1059 SUPERFAMILY RNI-like 342 694 - -
Mtr7g2170 1059 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 241 1058 - -
Mtr7g2170 1059 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 170 - -
Mtr7g2170 1059 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 166 240 - -
Mtr7g2170 1059 ProSiteProfiles Leucine-rich repeat profile. 577 599 IPR001611 GO:0005515
Mtr7g2170 1059 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Mtr7g2170 1059 ProSiteProfiles Protein kinase domain profile. 766 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2170 Mtr-Chr7 37904154 37926637 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2170 7 940 Receptor kinase-like Gene Family AT4G08850 43.861 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr7g2170 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2170 - - mtr:MTR_7g081410 1318.91