Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2168 ATGGTACTACCCACGTTCATCATCATGATTCTGTGTGTCCTTCCAACACTTTCTGTGGCTGAAGACAGTGAAGCAAAATTAGCACTCTTAAAATGGAAAGCTAGCTTTGACAACCAAAGTCAAAGTATCTTGTCAACTTGGAAAAATACCACAAATCCATGCAGCAAATGGAGAGGAATTGAGTGTGACAAATCCAATCTCATTTCTACCATAGATCTTGCAAATTTAGGACTAAAAGGTACACTTCACTCTCTCACCTTCTCTTCATTCCCCAACCTCATAACCCTAAATATCTATAACAACCACTTTTATGGAACCATTCCTCCACAAATAGGTAACTTGTCAAGAATAAATACATTGAATTTTTCAAAAAATCCTATTATTGGTTCCATCCCTCAAGAAATGTACACATTGAGGAGTTTAAAAGGCCTTGATTTTTTCTTTTGTACACTAAGTGGAGAAATTGATAAATCCATAGGAAATTTAACCAACCTATCATATCTAGATTTAGGAGGTAACAATTTTTCTGGTGGTCCCATTCCTCCTGAGATTGGAAAATTGAAGAAATTAAGGTATCTAGCAATTACACAAGGTAGCCTAGTTGGTTCCATTCCACAAGAAATTGGTTTGTTGACAAACCTTACTTATATTGATTTGTCAAACAACTTTCTATCTGGTGTTATCCCTGAAACCATAGGGAACATGAGCAAATTAAATCAACTCATGTTTGCTAATAACACCAAGTTGTATGGACCAATTCCTCACTCCTTGTGGAACATGTCTAGCTTGACCTTGATCTACCTTTATAACATGAGTCTTTCTGGTTCAATCCCTGATTCAGTACAAAACTTGATTAATTTGGATGTACTTGCACTTTATATGAATAACCTTTCTGGATTCATTCCTTCCACAATTGGAAACTTGAAAAACCTCACTTTATTGCTTTTGCGAAATAATCGACTTTCTGGATCAATTCCTGCCTCTATAGGAAATTTGATCAATTTGAAATACTTTAGTGTCCAAGTAAACAATCTCACAGGAACTATTCCAGCTACAATCGGAAATTTGAAGCAGCTCATTGTCTTTGAAGTAGCTTCCAACAAACTTTATGGTAGAATTCCAAATGGACTTTATAACATTACCAATTGGTATTCCTTTGTTGTGTCCGAAAATGATTTTGTTGGCCATTTGCCGTCTCAAATGTGCACCGGGGGCTCATTAAAATACTTAAGTGCATTTCATAATCGTTTCACTGGTCCAGTACCAACAAGTTTAAAAAGCTGCTCTAGCATTGAAAGAATCAGAATTGAGGGTAATCAAATCGAAGGAGATATAGCAGAAGATTTTGGTGTGTATCCGAATTTGCGATACGTTGACCTGAGTGATAATAAATTTCATGGCCACATTTCACCAAACTGGGGGAAGTCTCTTGATCTTGAAACCTTCATGATATCTAACACTAATATTTCTGGTGGTATACCATTAGATTTTATTGGTTTAACCAAGCTAGGTAGGCTTCATCTTTCTTCAAATCAATTGACAGGGAAACTTCCAAAGGAAATACTAGGAGGCATGAAATCATTATTATATCTCAAGATTAGTAACAATCATTTTACAGATAGCATCCCAACAGAAATTGGATTGCTGCAAAGGCTTGAAGAGTTGGATCTTGGAGGAAATGAGTTAAGTGGCACGATACCAAATGAAGTTGCAGAGCTACCGAAGTTACGAATGTTGAATTTGAGCAGAAACAGAATTGAAGGAAGAATTCCATCTACGTTTGATTCAGCTCTTGCTTCAATTGATCTTAGTGGCAATCGTTTGAATGGAAACATACCAACAAGTCTCGGATTCTTGGTGCAGTTGTCAATGTTGAATCTCTCACATAATATGCTTTCAGGAACCATTCCTTCAACTTTTAGTATGAGTTTGGATTTTGTTAACATATCAGACAACCAGTTAGATGGTCCACTTCCAGAAAATCCAGCTTTTCTTCGTGCTCCGTTTGAATCATTCAAAAATAACAAAGGCTTATGTGGAAATATCACAGGTTTGGTTCCGTGTGCAACAAGCCAGATCCATAGTAGAAAGAGCAAAAATATCCTTCAATCGGTATTTATTGCTTTAGGAGCTCTAATATTAGTGTTGAGTGGAGTTGGAATTTCGATGTATGTTTTTTTTCGGAGAAAAAAACCAAATGAAGAAATCCAAACTGAAGAAGAAGTACAAAAGGGAGTACTATTTTCGATTTGGAGCCATGATGGGAAAATGATGTTTGAAAATATCATTGAAGCTACTGAGAATTTTGATGACAAATATCTCATTGGAGTTGGAAGTCAAGGAAATGTTTACAAGGCAGAGTTGCCTACAGGATTGGTTGTTGCTGTGAAGAAGCTTCATTTAGTAAGAGATGAAGAAATGTCATTTTTCAGTTCGAAGTCTTTTACGAGTGAGATTGAAACCTTGACAGGAATCAAACACAGGAATATCATAAAGCTTCATGGATTTTGCTCACATTCTAAGTTCTCATTTTTAGTTTACAAGTTCATGGAAGGTGGAAGCTTAGATCAAATACTAAACAATGAAAAACAAGCCATTGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTCGCCAATGCTTTGTCCTACTTGCATCATGATTGCTCACCTCCTATTATTCATCGTGATATATCGAGCAAGAATATTCTTCTCAATCTTGACTATGAAGCTCATGTCTCCGACTTTGGGACAGCTAAGTTTCTTAAGCCTGACTTACATAGTTGGACACAATTTGCAGGCACTTTTGGGTATGCAGCTCCAGAGTTGTCCCAAACAATGGAAGTGAATGAGAAATGTGATGTATACAGCTTCGGAGTGCTTGCTTTGGAAATCATAATAGGAAAACATCCAGGAGATCTCATTTCATTATTTTTGTCACCATCTACAAGACCAACGGCTAATGATATGTTATTGACAGAGGTTTTAGATCAAAGACCTCAAAAAGTTATAAAACCAATTGATGAGGAGGTTATCTTGATTGCAAAGTTGGCATTTTCTTGCTTAAATCAAGTTCCACGTTCTCGTCCAACTATGGATCAAGTATGTAAGATGCTTGGAGCAGGAAAATCACCTTTGGAAAATCAATTTCACACGATCAAACTAGGGCAACTTCATTAA 3186 0.3653 MVLPTFIIMILCVLPTLSVAEDSEAKLALLKWKASFDNQSQSILSTWKNTTNPCSKWRGIECDKSNLISTIDLANLGLKGTLHSLTFSSFPNLITLNIYNNHFYGTIPPQIGNLSRINTLNFSKNPIIGSIPQEMYTLRSLKGLDFFFCTLSGEIDKSIGNLTNLSYLDLGGNNFSGGPIPPEIGKLKKLRYLAITQGSLVGSIPQEIGLLTNLTYIDLSNNFLSGVIPETIGNMSKLNQLMFANNTKLYGPIPHSLWNMSSLTLIYLYNMSLSGSIPDSVQNLINLDVLALYMNNLSGFIPSTIGNLKNLTLLLLRNNRLSGSIPASIGNLINLKYFSVQVNNLTGTIPATIGNLKQLIVFEVASNKLYGRIPNGLYNITNWYSFVVSENDFVGHLPSQMCTGGSLKYLSAFHNRFTGPVPTSLKSCSSIERIRIEGNQIEGDIAEDFGVYPNLRYVDLSDNKFHGHISPNWGKSLDLETFMISNTNISGGIPLDFIGLTKLGRLHLSSNQLTGKLPKEILGGMKSLLYLKISNNHFTDSIPTEIGLLQRLEELDLGGNELSGTIPNEVAELPKLRMLNLSRNRIEGRIPSTFDSALASIDLSGNRLNGNIPTSLGFLVQLSMLNLSHNMLSGTIPSTFSMSLDFVNISDNQLDGPLPENPAFLRAPFESFKNNKGLCGNITGLVPCATSQIHSRKSKNILQSVFIALGALILVLSGVGISMYVFFRRKKPNEEIQTEEEVQKGVLFSIWSHDGKMMFENIIEATENFDDKYLIGVGSQGNVYKAELPTGLVVAVKKLHLVRDEEMSFFSSKSFTSEIETLTGIKHRNIIKLHGFCSHSKFSFLVYKFMEGGSLDQILNNEKQAIAFDWEKRVNVVKGVANALSYLHHDCSPPIIHRDISSKNILLNLDYEAHVSDFGTAKFLKPDLHSWTQFAGTFGYAAPELSQTMEVNEKCDVYSFGVLALEIIIGKHPGDLISLFLSPSTRPTANDMLLTEVLDQRPQKVIKPIDEEVILIAKLAFSCLNQVPRSRPTMDQVCKMLGAGKSPLENQFHTIKLGQLH* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2168 1061 Gene3D Ribonuclease Inhibitor 382 690 IPR032675 -
Mtr7g2168 1061 SUPERFAMILY RNI-like 343 656 - -
Mtr7g2168 1061 Pfam Leucine rich repeat 529 586 IPR001611 GO:0005515
Mtr7g2168 1061 Pfam Leucine rich repeat 212 268 IPR001611 GO:0005515
Mtr7g2168 1061 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Mtr7g2168 1061 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 168 - -
Mtr7g2168 1061 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 239 1060 - -
Mtr7g2168 1061 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 164 238 - -
Mtr7g2168 1061 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 164 238 - -
Mtr7g2168 1061 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 239 1060 - -
Mtr7g2168 1061 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 168 - -
Mtr7g2168 1061 ProSiteProfiles Protein kinase domain profile. 769 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2168 1061 ProSitePatterns Tyrosine protein kinases specific active-site signature. 895 907 IPR008266 GO:0004672|GO:0006468
Mtr7g2168 1061 Gene3D Ribonuclease Inhibitor 270 381 IPR032675 -
Mtr7g2168 1061 Pfam Protein kinase domain 771 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2168 1061 SUPERFAMILY Protein kinase-like (PK-like) 753 1041 IPR011009 -
Mtr7g2168 1061 Gene3D Ribonuclease Inhibitor 180 269 IPR032675 -
Mtr7g2168 1061 Gene3D Transferase(Phosphotransferase) domain 1 850 1055 - -
Mtr7g2168 1061 SMART LRR_typ_2 162 187 IPR003591 -
Mtr7g2168 1061 SMART LRR_typ_2 211 234 IPR003591 -
Mtr7g2168 1061 SMART LRR_typ_2 308 332 IPR003591 -
Mtr7g2168 1061 SMART LRR_typ_2 90 114 IPR003591 -
Mtr7g2168 1061 SMART LRR_typ_2 284 307 IPR003591 -
Mtr7g2168 1061 SMART LRR_typ_2 573 596 IPR003591 -
Mtr7g2168 1061 SMART LRR_typ_2 500 524 IPR003591 -
Mtr7g2168 1061 SMART LRR_typ_2 619 642 IPR003591 -
Mtr7g2168 1061 SMART LRR_typ_2 549 572 IPR003591 -
Mtr7g2168 1061 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Mtr7g2168 1061 SUPERFAMILY RNI-like 71 379 - -
Mtr7g2168 1061 Gene3D Phosphorylase Kinase; domain 1 730 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2168 Mtr-Chr7 37866827 37870516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2168 3 943 Receptor kinase-like Gene Family AT4G08850 43.022 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr7g2168 Pkinase 2.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2168 - - mtr:MTR_7g081410 1325.07