Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2162 ATGTTCTTCCTCCAATCTTTCCACCATCGCCAAACTCCATCTTCTTATCCTCCCTCTCAATCATCAAACTCTATAGTACCTAACCGTTACCCTAACAGAAACGGTTACATCAAGTTCAGAACAACCTACAATGAAAATCTCCATTACCTAAAAGCACTAACCATAATAAACCCCAACACAAAACCAAACAACCTCCCTCACCCGGACACCATCAACCACATCCTCACCATCATCACATTCCTCAAATCCCACTCCTTCACCGAGGCCGACATCCCCCGGCTAGTACACCATTCTCCCCACCTCTTCACAACCTCCATCTCCCCTACCTCCCTCTCCCCCGTCTTCACCTTCCTTGCATCTGACCTCCTCGCCAGTGTGGAAGACTCCCACGGCCTCATCCTCCGCTGTCCTAACCTCCTCTTCACCGACGTAAACCATATCCTCAAACCAACCCTCCACTTCCTCCGCGAGGAAGTTGGAGTTAGTAACCTAAACAGGCCAACTAACCGGAACGCGCATCTTCTCAACACGCGTGTGGAGAAGATGCGCATGAGGGTGAGGTTTCTTGAGGAAGTGGTTGGGTTTACGTACGAGGAAGCGAGGAATGTTTGTGCGAGGTTGCCAGCGATATTGGGGTACGATGTGGAGAATAACTTGTGGCCGAAGTTTGTGTATTTGGTGAAAGAGATGGAGAGGGAGGTGGAAGAGTTGAAGAAGTTTCCGCAGTTTTTTGGGTTTAGTTTGGATAAGAGGATTGTTCCAAGGCATTTACATTTGAAAGAAAGAGGTGTTAGGATTCCTTTGAATAGAATGTTGATGTGGGGTGATGAAAAGTTCTATGCAAAGTGGAAGTGA 855 0.4772 MFFLQSFHHRQTPSSYPPSQSSNSIVPNRYPNRNGYIKFRTTYNENLHYLKALTIINPNTKPNNLPHPDTINHILTIITFLKSHSFTEADIPRLVHHSPHLFTTSISPTSLSPVFTFLASDLLASVEDSHGLILRCPNLLFTDVNHILKPTLHFLREEVGVSNLNRPTNRNAHLLNTRVEKMRMRVRFLEEVVGFTYEEARNVCARLPAILGYDVENNLWPKFVYLVKEMEREVEELKKFPQFFGFSLDKRIVPRHLHLKERGVRIPLNRMLMWGDEKFYAKWK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2162 284 Gene3D Transcription termination factor 3, mitochondrial 53 284 IPR038538 -
Mtr7g2162 284 SMART mt_12 92 125 IPR003690 GO:0003690|GO:0006355
Mtr7g2162 284 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Mtr7g2162 284 SMART mt_12 130 162 IPR003690 GO:0003690|GO:0006355
Mtr7g2162 284 SMART mt_12 201 233 IPR003690 GO:0003690|GO:0006355
Mtr7g2162 284 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Mtr7g2162 284 Pfam mTERF 126 279 IPR003690 GO:0003690|GO:0006355
Mtr7g2162 284 Pfam mTERF 78 191 IPR003690 GO:0003690|GO:0006355
Mtr7g2162 284 PANTHER CGI-12 PROTEIN-RELATED 22 284 IPR003690 GO:0003690|GO:0006355
Mtr7g2162 284 MobiDBLite consensus disorder prediction 7 29 - -
Mtr7g2162 284 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 22 284 - -
Mtr7g2162 284 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2162 Mtr-Chr7 37772314 37773168 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr7g2162 mTERF 4.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2162 K15032 - gmx:100812333 371.318