Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2145 ATGGCCGGCATAGACTTGGGTTCAGCATCACAACACTTTGTTCATCGCCTTCAACGTCCTGACCTAGAAGTTCATGATGAGAGTCAAGACCAAGATGGAAACAACAACAATAACCATGAAGGGCTTGACCTAGTTTCACCAAATCATGGTCTTGGAGATGTAGTTGGTCGCAGGCCGAGGGGAAGACCTCCGGGCTCAAAGAACAAACCTAAACCACCGGTGATCATCACAAGAGAGAGTGCAAACACACTTAGGGCTCACATCCTTGAAGTAAGTAGTGGTTGTGATGTGTTTGACTCTGTGGCTACTTATGCAAGAAAGCGTCAAAGAGGGATCTGTGTCCTTAGTGGGAGTGGAACAGTCACTAACGTGACCTTGCGACAGCCAGCTGCCGCAGGATCTGTAGTGACTTTACATGGAAGGTTTGAAATACTTTCTTTGTCCGGATCGTTTCTACCACCACCAGCTCCTCCAGGAGCTACAAGTTTGAGTGTGTTCCTTGGTGGAGGCCAAGGTCAAGTTGTGGGAGGAAATGTTGTTGGTCCTTTGGTTGCTTCTGGACCGGTTATTGTCATCGCTTCATCTTTTACGAATGTAGCGTATGAGAGGTTACCGTTGGATGAAGATGAATCTCTTCAGATGCAACAAGGGCAATCATCTGCAGGTGGTGGTGGCGGTGGCGGTGATGGTGTCAATAACTCTTTTCCCGATCCATCATCCGGGCTCCCGTTCTTTAATTTGCCTCTAAATATGCCTCAATTACCAGTGGATGGTTGGGCTGGAAACTCTGGTGGAAGACAATCTTATTGA 810 0.4765 MAGIDLGSASQHFVHRLQRPDLEVHDESQDQDGNNNNNHEGLDLVSPNHGLGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGATSLSVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEDESLQMQQGQSSAGGGGGGGDGVNNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGRQSY* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2145 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 198 IPR005175 -
Mtr7g2145 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 269 IPR014476 GO:0003680
Mtr7g2145 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 212 - -
Mtr7g2145 269 CDD DUF296 85 167 IPR005175 -
Mtr7g2145 269 MobiDBLite consensus disorder prediction 210 246 - -
Mtr7g2145 269 MobiDBLite consensus disorder prediction 24 75 - -
Mtr7g2145 269 ProSiteProfiles PPC domain profile profile. 81 218 IPR005175 -
Mtr7g2145 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 269 - -
Mtr7g2145 269 Gene3D - 84 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2145 Mtr-Chr7 37637306 37638727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2145 1 266 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.816 2.50e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2145 - - vra:106758954 418.313