Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2125 ATGTCATTTACGAAGCTCAAAAAGCTCTTACCGATTACCTCCACAACACCAAATCCATACCCTTCACCTATGCAGAACACATTGGCAACAATACTTTCTGTTCCCTCACAAATCTCATTTCAAAGGACTCTTTTGGAAGCTGCTTGTGTGCTTTGTGATTTTGGGTTTCCTTGGGAGAAGTTAGGTGTGTTGTATATGGAGAAGAGTTCTATATTTGGGAAAAGTGTTGAAGAGTTGAAATTGAGGCTTTGTTGGTTTAAAAGATTTGGTTTTGGTAATGTTGAAGTTATTGGGATTTGTTTGGCTTTTCCTTTTGTTTTGAGTGAGGAAGTGGATCAAATTCAAAAGGGTGTTTTTGGGATTGATGGGTTGTTTAGTGATCTAAAGTTGATTTTTTTGGATAATTCTTTGGGAAGTTATGTTGAGGGGAATGTAGATTCTTGGTATGAGGTGTGTAGAAAATTGAGGATGTTTTTCGATTTAAGTGGATGGAAGGGTAATGTAGGAGAACTCATGGGGAAGAATAAGAGTATATTTGTTGATCACAAAGAAGATGAGATAGTACATAGAGTAGAGTATTTGTGTAGATTTGGTGGAAAGAAGGAGGAAGTGGCTTTGTTGATTCTACAATGTCCTGAAGTGTTGAAGCTTGATTTGGAGAAGACAGTGATTAATGTGTTGGAGCTGTTGAAACACTTTGGCATGAGCTCTAAAGATTTGGAGGATGTTATTGAAAATTTTGGTCACGTGTTGGGAACAATTAGAATGGTTAATCTACCAAATGTGATGAGAGCTATGGGTTTGCAAGAATGGTTCTGTGATAAGTTAAAGGGTGGACATCATCAGTTGTTAGCGGATTATATCGCAAGTGATCGTAATGAAGACAGGGATAAAGTTTATCAAGATGGTTTGAGGAGAATTCACATTTCACGAGCTCGAGTTCATAGCATTAATAAGTTAAATTTCTTACATAGATTAGGCTTTGGAGAAAATGCATTGACTATGAATCTTTTGGATTGTTTGCACGGCACAAGCAGTGAGTTACAGGAAAGATTTGACTGCCTTCTTCGCTCAAGAATTGAATTCTCAAAGCTCTGCATGATGGTAAGAAAAACCCCAAGGATTCTGAACCAAAATTATGAAATTATAGAGCAAAAAGTGATTTTTTTCAACCAGAAAATGGGAACAACTTTGGACTATCTGGAAACTTTTCCAGCAATGTTGCATTATCACTTGGATGACCGAATTATACCTAGGTACAGATTCCATACGTGGCTTACAGAAAGGGGTCTGTCTTATAGAAAATATTCCGTTCAAAGTATGATCACTGATAGTGAAAAGAAATTTGTAGCCCGAGTGTTTAAAATTCACCCAGCTGCTCCAAAACATTGGTTCGAGCAATTCTGTCGCCGTAAATTGCCAATGTAA 1428 0.3725 MSFTKLKKLLPITSTTPNPYPSPMQNTLATILSVPSQISFQRTLLEAACVLCDFGFPWEKLGVLYMEKSSIFGKSVEELKLRLCWFKRFGFGNVEVIGICLAFPFVLSEEVDQIQKGVFGIDGLFSDLKLIFLDNSLGSYVEGNVDSWYEVCRKLRMFFDLSGWKGNVGELMGKNKSIFVDHKEDEIVHRVEYLCRFGGKKEEVALLILQCPEVLKLDLEKTVINVLELLKHFGMSSKDLEDVIENFGHVLGTIRMVNLPNVMRAMGLQEWFCDKLKGGHHQLLADYIASDRNEDRDKVYQDGLRRIHISRARVHSINKLNFLHRLGFGENALTMNLLDCLHGTSSELQERFDCLLRSRIEFSKLCMMVRKTPRILNQNYEIIEQKVIFFNQKMGTTLDYLETFPAMLHYHLDDRIIPRYRFHTWLTERGLSYRKYSVQSMITDSEKKFVARVFKIHPAAPKHWFEQFCRRKLPM* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2125 475 Gene3D Transcription termination factor 3, mitochondrial 27 138 IPR038538 -
Mtr7g2125 475 Gene3D Transcription termination factor 3, mitochondrial 141 275 IPR038538 -
Mtr7g2125 475 Gene3D Transcription termination factor 3, mitochondrial 306 471 IPR038538 -
Mtr7g2125 475 Pfam mTERF 180 253 IPR003690 GO:0003690|GO:0006355
Mtr7g2125 475 Pfam mTERF 320 449 IPR003690 GO:0003690|GO:0006355
Mtr7g2125 475 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 41 468 - -
Mtr7g2125 475 PANTHER CGI-12 PROTEIN-RELATED 41 468 IPR003690 GO:0003690|GO:0006355
Mtr7g2125 475 SMART mt_12 62 92 IPR003690 GO:0003690|GO:0006355
Mtr7g2125 475 SMART mt_12 366 397 IPR003690 GO:0003690|GO:0006355
Mtr7g2125 475 SMART mt_12 398 432 IPR003690 GO:0003690|GO:0006355
Mtr7g2125 475 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Mtr7g2125 475 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2125 Mtr-Chr7 37460944 37462635 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr7g2125 mTERF 4.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2125 - - mtr:MTR_7g080620 887.486