Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2118 ATGGCCTCTATGAACTTGTTAGGTTTCTCTCTATCTCCACAAGAACAACATCCATCAACACAAGATCAAACGGTGGCTTCCCGTTTTGGGTTCAACCCTAATGAAATCTCAGGCTCTGATGTTCAAGGAGATCACTGCTATGATCTCTCTTCTCACACAACTCCTCATCATTCACTCAACCTTTCTCATCCTTTTTCCATTTATGAAGCTTTCCACACAAATAACAACATTCACACCACTCAAGATTGGAAGGAGAACTACAACAACCAAAACCTACTATTGGGAACATCATGCATGAACCAAAATGTGAACAACAACAACCAACAAGCACAACCAAAGCTAGAAAACTTCCTCGGTGGACACTCTTTCACCGACCATCAAGAATACGGTGGTAGCAACTCATACTCTTCATTACACCTCCCACCTCATCAGCCGGAAGCATCCTGTGGCGGTGGTGATGGTAGTACAAGTAACAATAACTCAATAGGTTTATCTATGATAAAAACATGGCTCAGAAACCAACCACCACCACCAGAAAACAACAACAATAACAACAATGAAAGTGGTGCACGTGTGCAGACACTATCACTTTCTATGAGTACTGGCTCACAGTCAAGTTCATCTGTGCCTCTTCTCAATGCAAATGTGATGAGTGGTGAGATTTCCTCATCGGAAAACAAACAACCACCCACAACTGCAGTTGTACTTGATAGCAACCAAACAAGTGTCGTTGAAAGTGCTGTGCCTAGAAAATCCGTTGATACATTTGGACAAAGAACTTCCATTTACCGTGGTGTAACAAGGCATAGATGGACAGGGAGATATGAAGCTCACCTTTGGGATAATAGTTGTAGAAGAGAGGGGCAGACTCGCAAAGGAAGGCAAGTTTACTTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGAGCCTATGATTTGGCAGCACTAAAATATTGGGGAACAACTACTACAACAAATTTTCCAATTAGCCATTATGAAAAAGAAGTGGAAGAAATGAAGCATATGACAAGGCAAGAGTACGTTGCGTCATTGAGAAGGAAAAGTAGTGGTTTTTCACGAGGTGCATCCATTTACCGAGGAGTAACAAGACATCATCAACATGGTAGATGGCAAGCTAGGATTGGAAGAGTTGCAGGCAACAAAGATCTCTACCTAGGAACTTTCAGCACTCAAGAAGAGGCAGCAGAGGCATATGATGTGGCAGCAATAAAATTCAGAGGACTGAGTGCAGTTACAAACTTTGACATGAGCAGATATGATGTCAAAACCATACTTGAGAGCAGCACATTACCAATTGGTGGTGCTGCAAAGCGTTTAAAAGACATGGAGCAAGTTGAATTGAATCATGTGAATGTTGATATTAGCCATAGAACTGAACAAGATCATAGCATCATCAACAACACTTCCCATTTAACAGAACAAGCCATCTATGCAGCAACAAATGCATCTAATTGGCATGCACTTTCATTCCAACATCAACAACCACATCATCATTACAATGCCAACAACATGCAGTTACAGAATTATCCTTATGGAACTCAAACTCAAAAGCTTTGGTGCAAACAAGAACAAGATTCTGATGATCATAGTACTTATACTACTGCTACTGATATTCATCAACTACAGTTAGGGAATAATAATAACAATACTCACAATTTCTTTGGTTTACAAAATATCATGAGTATGGATTCTGCTTCCATGGATAATAGTTCTGGATCTAATTCTGTTGTTTATGGTGGTGGAGATCATGGTGGTTATGGAGGAAATGGTGGATATATGATTCCAATGGCTATTGCAAATGATGGTAACCAAAATCCAAGAAGCAACAACAATTTTGGTGAGAGTGAGATTAAAGGATTTGGTTATGAAAATGTTTTTGGGACTACTACTGATCCTTATCATGCACAGGCAGCAAGGAACTTGTACTATCAGCCACAACAATTATCTGTTGATCAAGGATCAAATTGGGTTCCAACTGCTATTCCAACACTTGCTCCAAGGACTACCAATGTCTCTCTATGTCCTCCTTTCACTTTGTTGCATGAATAG 2070 0.4019 MASMNLLGFSLSPQEQHPSTQDQTVASRFGFNPNEISGSDVQGDHCYDLSSHTTPHHSLNLSHPFSIYEAFHTNNNIHTTQDWKENYNNQNLLLGTSCMNQNVNNNNQQAQPKLENFLGGHSFTDHQEYGGSNSYSSLHLPPHQPEASCGGGDGSTSNNNSIGLSMIKTWLRNQPPPPENNNNNNNESGARVQTLSLSMSTGSQSSSSVPLLNANVMSGEISSSENKQPPTTAVVLDSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKTILESSTLPIGGAAKRLKDMEQVELNHVNVDISHRTEQDHSIINNTSHLTEQAIYAATNASNWHALSFQHQQPHHHYNANNMQLQNYPYGTQTQKLWCKQEQDSDDHSTYTTATDIHQLQLGNNNNNTHNFFGLQNIMSMDSASMDNSSGSNSVVYGGGDHGGYGGNGGYMIPMAIANDGNQNPRSNNNFGESEIKGFGYENVFGTTTDPYHAQAARNLYYQPQQLSVDQGSNWVPTAIPTLAPRTTNVSLCPPFTLLHE* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2118 689 PANTHER BNAC02G44180D PROTEIN 5 623 - -
Mtr7g2118 689 SUPERFAMILY DNA-binding domain 363 424 IPR016177 GO:0003677
Mtr7g2118 689 CDD AP2 261 330 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 Gene3D AP2/ERF domain 262 330 IPR036955 GO:0003700|GO:0006355
Mtr7g2118 689 Gene3D AP2/ERF domain 364 424 IPR036955 GO:0003700|GO:0006355
Mtr7g2118 689 Pfam AP2 domain 364 414 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 Pfam AP2 domain 262 320 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 MobiDBLite consensus disorder prediction 128 162 - -
Mtr7g2118 689 ProSiteProfiles AP2/ERF domain profile. 262 328 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 MobiDBLite consensus disorder prediction 1 23 - -
Mtr7g2118 689 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 623 - -
Mtr7g2118 689 SUPERFAMILY DNA-binding domain 261 330 IPR016177 GO:0003677
Mtr7g2118 689 PRINTS Ethylene responsive element binding protein signature 263 274 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 PRINTS Ethylene responsive element binding protein signature 404 424 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 SMART rav1_2 364 428 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 SMART rav1_2 262 334 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 ProSiteProfiles AP2/ERF domain profile. 364 422 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 CDD AP2 363 424 IPR001471 GO:0003700|GO:0006355
Mtr7g2118 689 MobiDBLite consensus disorder prediction 170 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2118 Mtr-Chr7 37380941 37385281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2118 161 501 AP2-EREBP Transcription Factor Family AT5G17430 65.396 8.39e-140 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mtr7g2118 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2118 K09285 - gmx:100797584 852.047