Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2098 ATGAAAAATTGTTATCCATTTCAAGTGATGGTTTGTTATATCAAGGTTCAAGAGGCGCAGTCGCAGAAGAACCTCGTGAATTCAACAATGGCCAGGATCAAAGTTCACGAGTTGAGGCAGAAGACCAAAGCTGATCTATTGGCTCAGCTCAAAGACCTCAAAGCTGAACTAGCTTTGCTCCGTGTTGCTAAGGCCACTCGGGCTGCACCCAACAATCTCTCCAAAATTAAGGAGGTAAGGTTGTCGATTGCTCAGGTTTTGACAGTGATTTCCCAGAAGCGGAAAGCTGCATTGAGGGAAGTTTACAAGAACAAGAAGTATTTGCCAATTGATCTCCGCCCAAAGAAGACCAGGGCCGTTCGCAGGAGGCTCACCAAGCATCAGTCCTCATTGAAGACCGAGATGGAAAAGAAAAAGGAGACATATTTCACAATGAGGAAATATGCTATCAAGGCATAG 459 0.4488 MKNCYPFQVMVCYIKVQEAQSQKNLVNSTMARIKVHELRQKTKADLLAQLKDLKAELALLRVAKATRAAPNNLSKIKEVRLSIAQVLTVISQKRKAALREVYKNKKYLPIDLRPKKTRAVRRRLTKHQSSLKTEMEKKKETYFTMRKYAIKA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2098 152 SUPERFAMILY Ribosomal protein L29 (L29p) 33 93 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mtr7g2098 152 PANTHER 60S RIBOSOMAL PROTEIN L35 30 151 IPR045059 GO:0000463|GO:0022625
Mtr7g2098 152 TIGRFAM L29: ribosomal protein uL29 37 93 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mtr7g2098 152 Coils Coil 43 63 - -
Mtr7g2098 152 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 30 151 - -
Mtr7g2098 152 Gene3D - 107 152 - -
Mtr7g2098 152 Pfam Ribosomal L29 protein 37 93 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mtr7g2098 152 Gene3D - 30 106 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mtr7g2098 152 Hamap 50S ribosomal protein L29 [rpmC]. 33 93 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mtr7g2098 152 CDD Ribosomal_L29_HIP 37 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2098 Mtr-Chr7 37197622 37202718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2098 30 151 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 81.148 8.25e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2098 K02918 - sly:101267698 184.496