Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2069 ATGCAAGAAGCATGGGATTCAACTAAGAACAAAGCCAATAATGCTGCTGACAGTGTAAAACAGACTTGTGCAGATGGAAAAGCAGAGGTAGAGGCAAAGGCAGATAGGGCTGCTGAGAATGTAAAACAGACTTGCGCAGATGGAAAGGCAGAGGCAGAGGCAAGGGCAGATAGTGTTTCTGATAAGGTTTCTGAAAAAACTAAACAATCAGCTGAGTATGTCAAAGATAATGCTGAGGCAATCAAGTATACTCATGCATGCAGCCCAATAGATGCAACTTTGGTGGCTACAGGGGGTGGTGATGCCAGAGGAATTTTATGGAAGATTGGCCAAGGAAATAGGGCTTCTGAGCTTCAAGGTCATTCTGATTCTGTATCTAGTTTAGCTTTTAGCTATGATGGGAAGTTTCTTGCATCTGGAAGCATGGATGGAATTGTTCAAGTTTGGGATGTATATGGAAATTTGAGTAGTGTGCTTAATGGTCCTAATGGTGGCATTGAGGTAAAATGA 510 0.4235 MQEAWDSTKNKANNAADSVKQTCADGKAEVEAKADRAAENVKQTCADGKAEAEARADSVSDKVSEKTKQSAEYVKDNAEAIKYTHACSPIDATLVATGGGDARGILWKIGQGNRASELQGHSDSVSSLAFSYDGKFLASGSMDGIVQVWDVYGNLSSVLNGPNGGIEVK* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2069 169 Coils Coil 49 69 - -
Mtr7g2069 169 MobiDBLite consensus disorder prediction 1 20 - -
Mtr7g2069 169 Pfam WD domain, G-beta repeat 117 150 IPR001680 GO:0005515
Mtr7g2069 169 SMART WD40_4 111 150 IPR001680 GO:0005515
Mtr7g2069 169 ProSitePatterns Trp-Asp (WD) repeats signature. 137 151 IPR019775 -
Mtr7g2069 169 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 151 IPR001680 GO:0005515
Mtr7g2069 169 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 151 - -
Mtr7g2069 169 Gene3D - 66 160 IPR015943 GO:0005515
Mtr7g2069 169 MobiDBLite consensus disorder prediction 1 68 - -
Mtr7g2069 169 MobiDBLite consensus disorder prediction 24 68 - -
Mtr7g2069 169 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 33 165 - -
Mtr7g2069 169 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 33 165 - -
Mtr7g2069 169 SUPERFAMILY WD40 repeat-like 86 152 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2069 Mtr-Chr7 36933234 36935163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2069 74 168 U-box Gene Family AT2G33340 27.835 3.11e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2069 K24725 K03130 mtr:MTR_7g079470 180.259