LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g2064	ATGAATACCTTGGATCTTAAACTACACCTCAAAATTGAAGTGCAACTCATCAAACTCATGAAGTTTCTTTATCTTTACATTCTCTTATGTATGTTACCTTACTCAATCAACTGCCAACAGATATTACTTAACACCACTGTCACTGATTGCTCAGGCACCCCTTCAGCACCAAAAGGATACCTATGCAATAGTCCTCAAAACTCATGCAATTCATTCTTAACTTTCAGGTCAAAACCTTCTTATGACAACCCTACAAGTATTGCTTACCTTCTTGGCTCAGAAGCATCGACCATAGCCTCAATCAACAACATCTCAAGAAATGAAAAACTTCCAACCAATAAAACAATCATTGTCCCTATCTTGTGCTCATGTTCTGGAAATATCTACCAACATAACACTCCTTACACTGTCCAAAAAGGTGATACATACTTTCACTTGGTAAATGAAACTTACCAAAGCCTCACAACATGTCAAGCTTTGAAGGGTCAGAATTATTATGCTTCTGAAAACATTGCAATTGGTGCCGAGGTAACAGTTCCAGTACTTTGTGCTTGTCCTACAACAACACAGATGGCGAAAGGGATCACTTCCTTGCTGGTTTACATAGTGAACTATGGTGAAACTGTTAAGTCTATAGGAGAGGCTTATGGTGTTGATGAACAAAGCATATTAGAGGCAAATGAGTTGCAACCAAGTGAAAACAGAAGTGTGATTCTCTTTGCGTTGACACCGATATTACTTCCTCTTAGAGGCAAGAGCTGCAAAGAGGATCCTGATAGTTTCTACTGTACTTGTTCTCAGGGAAGGCTAGCAGATGGAAGTTGTAATGAATCCCATGGTCAAAAGTTTCCTGCCAAGTTGGTTGCTGCATTAGGTGTTGGTATTGGTGCAGGCTTTCTGGTATTGTTTCTGCTTAGTTACAGGTTATATCAATACATAAAGAAAAAGAGAGCGAGTATTCGTAAGGAAAAGTTATTCAGGCAAAACGGTGGTTACTTGTTACAAGAGAAGTTATCATCATATGGAAATGGAGAAATGGCAAAGCTTTTTACAGCAGAGGAGCTCCAAAGAGCAACAGATGACTACAACCAAAGTAGGTTTCTTGGTCAAGGCGGCTATGGCACAGTGTACAAAGGAATGCTACCAGATGGAACCATAGTCGCAGTTAAAAAGTCAAAACACCTTGACAGAAACCAAATAGAAACGTTTGTCAACGAAGTAGTCATCTTATCTCAGATCAACCACAGGAACATTGTCAAACTTTTAGGTTGTTGTCTTGAGACAGAAACTCCATTACTTGTCTATGAATACATTCACAGCGGAACTCTTTCCCAACATATCCATGGGAAAGACCGTGATTCATCCCTTTCATGGGAAAGTCGCCTTAGAATTGCATGTGAGGTTGCCGGAGCAGTGACATATATGCATTTCTCAGCTTCTATTCCAATCTTCCATAGAGACATAAAACCAAGTAACATACTCCTAGACAATAACTATAGTGCCAAAGTGTCTGATTTTGGAACATCTAGATCAATCCCATTAGATAAGACTCATTTAACCACAGCAGTAGGAGGTACTTTTGGGTACATGGATCCTGAATATTTTCAGTCAAGTCAATTTACAGATAAGAGTGATGTATATAGTTTCGGCGTGGTGCTTGTTGAGCTTATAACCGGTAGAAAGCCAATAACATTCAATGATGAAGATGAGGGTCAGAATATGACGGCACATTTCATTTCAGTGATGAAGGAAAACCAACTTCCTCAAATTTTAGATAACGCATTGGTTAATGAAGCAAGGAAAGATGACATTCTAGCTATTGCAAATCTTGCAATGAGATGTTTGAGACTTAATGGTAAGAAAAGACCAACAATGAAAGAGGTTTCAATGGAATTAGAAGCACTAAGAAAGGTACAGAGTTCCTTACATATCAAAGATGATCAAGAATCACCAAGTGATGAACAATCACTTAGGCATACAACTAATGATACATTTCATGAGTCTACAGTGGAAAGCTTTTCGCTATCCTCGCAAATGGAGTCCACATACTTCTAA	2055	0.3878	MNTLDLKLHLKIEVQLIKLMKFLYLYILLCMLPYSINCQQILLNTTVTDCSGTPSAPKGYLCNSPQNSCNSFLTFRSKPSYDNPTSIAYLLGSEASTIASINNISRNEKLPTNKTIIVPILCSCSGNIYQHNTPYTVQKGDTYFHLVNETYQSLTTCQALKGQNYYASENIAIGAEVTVPVLCACPTTTQMAKGITSLLVYIVNYGETVKSIGEAYGVDEQSILEANELQPSENRSVILFALTPILLPLRGKSCKEDPDSFYCTCSQGRLADGSCNESHGQKFPAKLVAALGVGIGAGFLVLFLLSYRLYQYIKKKRASIRKEKLFRQNGGYLLQEKLSSYGNGEMAKLFTAEELQRATDDYNQSRFLGQGGYGTVYKGMLPDGTIVAVKKSKHLDRNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEYIHSGTLSQHIHGKDRDSSLSWESRLRIACEVAGAVTYMHFSASIPIFHRDIKPSNILLDNNYSAKVSDFGTSRSIPLDKTHLTTAVGGTFGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGRKPITFNDEDEGQNMTAHFISVMKENQLPQILDNALVNEARKDDILAIANLAMRCLRLNGKKRPTMKEVSMELEALRKVQSSLHIKDDQESPSDEQSLRHTTNDTFHESTVESFSLSSQMESTYF*	685

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g2064	684	MobiDBLite	consensus disorder prediction	642	665	-	-
	Mtr7g2064	684	SMART	LysM_2	80	119	IPR018392	-
	Mtr7g2064	684	SMART	LysM_2	200	248	IPR018392	-
	Mtr7g2064	684	SMART	LysM_2	134	180	IPR018392	-
	Mtr7g2064	684	PANTHER	LYSM TYPE RECEPTOR KINASE	38	668	-	-
	Mtr7g2064	684	Pfam	LysM domain	201	232	IPR018392	-
	Mtr7g2064	684	Gene3D	Transferase(Phosphotransferase) domain 1	438	659	-	-
	Mtr7g2064	684	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	483	495	IPR008271	GO:0004672\|GO:0006468
	Mtr7g2064	684	ProSiteProfiles	Protein kinase domain profile.	362	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g2064	684	SUPERFAMILY	Protein kinase-like (PK-like)	345	632	IPR011009	-
	Mtr7g2064	684	MobiDBLite	consensus disorder prediction	666	684	-	-
	Mtr7g2064	684	Pfam	Protein kinase domain	362	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g2064	684	MobiDBLite	consensus disorder prediction	642	684	-	-
	Mtr7g2064	684	SMART	serkin_6	362	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g2064	684	ProSitePatterns	Protein kinases ATP-binding region signature.	368	391	IPR017441	GO:0005524
	Mtr7g2064	684	CDD	STKc_IRAK	368	635	-	-
	Mtr7g2064	684	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21	38	668	IPR045274	GO:0007166
	Mtr7g2064	684	Gene3D	Phosphorylase Kinase; domain 1	335	437	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g2064	Mtr-Chr7	36878159	36881598	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g2064	284	657	Receptor kinase-like Gene Family	AT1G16120	56.000	3.08e-143	433

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK	Mtr7g2064		Pkinase	1.5e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g2064	-		-	mtr:MTR_7g079350	1337.78