Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2052 ATGGAAGAAGATTGGGATCTCCATGCGGTGGTTAGAGGTTGCTCCACCATTTCAACCACCACACCTACATCCTCTGTTTCCTCTTCCTCTGTTTTTCCCCTGCAACCTGAACCTTCTTGTGGCTACTCTTCTATTTTTAGTAGTGAACAAAAACCTCAAATTTTGTCACTTTCTTGTTCTACACTCCCTTTTGAAGCTAGAAGCTCCATTGAAGAGTTGCATGAACTTTGCAAGCCTTTCTTTTCAAGATCATCACAGCCTCTTTCTTTGCAAACTTCTCCTTTGTTTTCTTCATTATCTTATTCCTCTGCTTCACCCAGATTAGCTCAAACACAAGACAAACAACAACTGCAAAGAAGTAAACATTCACACCAAGGTGGTTCTCTCACCAACCCAAGATCAAAAAGAAGGAAAAATCAACTTAAGAAAGTTTGTCAAGTACCAGTTGAGAGTCTCTCTTCAGATATATGGGCATGGAGGAAATATGGACAAAAACCTATAAAAGGGTCACCATATCCAAGGGGATATTATAGATGTAGCAGTTCAAAAGGGTGTTTAGCAAGAAAACAAGTTGAAAGAAACAGAACAGATCCAACAATGTTCATAGTAACATATACATGTGAACACAATCATCCTGCTCCTACACACAAAAACTCTCTTGCTGGTTCAACAAGGCAGAAGCCATTAACACCTCCTCAAGGTGAAACAAACAAAGATCTTACAAAACCCTCTTCTCCTACTACCTCAGGAGGTGAAGAAGAGGTTCAAACTCAAGGAGATAAGTCAGAAAGTAGAGAAGAAAAGGAAGATTCTTTGATGGATGATGAAGAAGGAGATGAATTTGGTTTATCTGATGTTGTTTTAAGTGATGATTTCTTTGAGAGTTTAGATGAATTTGGTTTCCCAGATCCATTTTCTTCTGCTATTTCAATTCCTAATTGGGTTGCTAATACTGCTGCTGCTACTACAGCTGCTGGTGGTAGCTGA 987 0.3921 MEEDWDLHAVVRGCSTISTTTPTSSVSSSSVFPLQPEPSCGYSSIFSSEQKPQILSLSCSTLPFEARSSIEELHELCKPFFSRSSQPLSLQTSPLFSSLSYSSASPRLAQTQDKQQLQRSKHSHQGGSLTNPRSKRRKNQLKKVCQVPVESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRTDPTMFIVTYTCEHNHPAPTHKNSLAGSTRQKPLTPPQGETNKDLTKPSSPTTSGGEEEVQTQGDKSESREEKEDSLMDDEEGDEFGLSDVVLSDDFFESLDEFGFPDPFSSAISIPNWVANTAAATTAAGGS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2052 328 SUPERFAMILY WRKY DNA-binding domain 152 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g2052 328 MobiDBLite consensus disorder prediction 211 255 - -
Mtr7g2052 328 ProSiteProfiles WRKY domain profile. 148 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g2052 328 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 327 - -
Mtr7g2052 328 MobiDBLite consensus disorder prediction 107 134 - -
Mtr7g2052 328 MobiDBLite consensus disorder prediction 211 283 - -
Mtr7g2052 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 327 IPR044810 GO:0003700
Mtr7g2052 328 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g2052 328 Gene3D WRKY domain 137 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g2052 328 SMART WRKY_cls 153 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g2052 328 MobiDBLite consensus disorder prediction 107 144 - -
Mtr7g2052 328 MobiDBLite consensus disorder prediction 269 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2052 Mtr-Chr7 36762157 36763974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2052 1 325 WRKY Transcription Factor Family AT4G01250 47.093 1.19e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr7g2052 WRKY 9.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2052 K13425 - gmx:100798084 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2052 7 36762157 36763974 Mtr1g3697 1 48635377 48637356 ECH
Mtr7g2052 7 36762157 36763974 Mtr7g2052 7 36762157 36763974 ECH
Mtr8g0892 8 10975353 10977698 Mtr7g2052 7 36762157 36763974 ECH
Mtr8g3504 8 45590205 45591690 Mtr7g2052 7 36762157 36763974 ECH
Mtr7g2052 7 36762157 36763974 Mtr8g0892 8 10975353 10977698 PCT