Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2042 ATGGCTACAACCCCTTCTCTTCTACACTCTTCTGCCTCTTCCTTTCTCTCTCAATTTCGAGCTTTACCAACTCAATTTTCTTCCTCTTCGTTGTTATGTCATGGAAACAACAGAGTGGTGTCTGTGAAAGCTGATGCTTCTGGTGCTGTTTTGGTTGAGAAATCTGAAGCAGAGACTGTTTATAGACTCAAAACAACTTACAATGACAAAATTGTTCCTTTGCTTATGGAAGAATTCTCTTACACTAATATTCATCAGGTGCCTAAAGTTAAGAAGATTGTGGTAAACTGTGGTATTGGAGAAGCTGCACAAAATGCAAAAGGTTTGGATGCAGCAATACTTGATCTAGCACTGATCACTGGGCAGAGACCTGTTAAGACTCGGGCGAGGAATTCCGTTGCCACCTTCAAGATCAGGGAAGGTCAACCACTTGGGATTGCTGTGACACTCAGAGGAAAAATAATGTACTCATTCCTAGACCGTGTTATCAACTTAGGACTTCCTAGGACAAGAGATTTTCAAGGTGTGAATATCAGCAGCTTTGACGGGAATGGAAATTACAACATTGGTATTAAGGACCAAACTGTGTTCCCAGAGCTGAAATCTGGTATTGGTACACCTAGAGGAATGGATATCTGCATCTCAACAACTGCTAAAACTGATCAAGAAGGACAAAAATTATTGGCTCTCATGGGTATGCCCTTCAGAGAGGGAGTTGAAGTTACCCAAATAGTTCGCAAAAAGAAGTTGAAATCTCATCATTTTGATCCAAAATCAAAGGGTAGAGGAGACAGAGCAAAGAAGTAA 807 0.4089 MATTPSLLHSSASSFLSQFRALPTQFSSSSLLCHGNNRVVSVKADASGAVLVEKSEAETVYRLKTTYNDKIVPLLMEEFSYTNIHQVPKVKKIVVNCGIGEAAQNAKGLDAAILDLALITGQRPVKTRARNSVATFKIREGQPLGIAVTLRGKIMYSFLDRVINLGLPRTRDFQGVNISSFDGNGNYNIGIKDQTVFPELKSGIGTPRGMDICISTTAKTDQEGQKLLALMGMPFREGVEVTQIVRKKKLKSHHFDPKSKGRGDRAKK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2042 268 Hamap 50S ribosomal protein L5 [rplE]. 60 237 IPR020930 GO:0003735|GO:0005840|GO:0006412
Mtr7g2042 268 Gene3D - 54 237 IPR022803 -
Mtr7g2042 268 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 57 237 IPR002132 GO:0003735|GO:0005840|GO:0006412
Mtr7g2042 268 SUPERFAMILY RL5-like 62 236 IPR022803 -
Mtr7g2042 268 Pfam ribosomal L5P family C-terminus 143 235 IPR031309 -
Mtr7g2042 268 ProSitePatterns Ribosomal protein L5 signature. 116 132 IPR020929 GO:0003735|GO:0005840|GO:0006412
Mtr7g2042 268 Pfam Ribosomal protein L5 83 139 IPR031310 -
Mtr7g2042 268 MobiDBLite consensus disorder prediction 249 268 - -
Mtr7g2042 268 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 57 237 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2042 89 192 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 31.776 3.57e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2042 K02931 - gmx:100818896 378.252