Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2041 ATGTTTGCAACAGGTGGTGCCTTTCTCTCCGCTCCTATTTTAACCATGATGGACAAACTAACCTCAACAGAGTTTCAAGATTACGTCAACAACATGAAGCTGAATCACTCTCTCTTGAAGCAGTTGCAAACAACACTTCTCACTCTTGAAGCGGTGCTAGTTGATGCAGAGAGGAAGCAGATCCATGATCCGGCTGTCCGAGAATGGCTTAATGATTTAAAAGATGCAATCTATGATACAGAGGATTTGCTGAACCAAATTAGTTACGATTCCATACAATCCAAGGTCACAAATCAGGTGCTGAACTTCCTTTCATCTCTTTTTTCTAACACCAATGGAGAAGTGAATTCCCAAATAAAGATATCTTGTGAAAGACTGCAGCTCTTTGCCCAACAGAAAGATATCCTTGGCTTGCAAACGGTAAGTTGGAAGGTTTTGACTGGACCTCCTACAACATTACTAGTAAATGAATATGTCACGGTTGGTAGGAAGGATGATAAAGAGGAACTAGTTAATATGTTGATATCAGATACAGACAATAATAATATAGGTGTAGTCGCAATTACAGGCATGGGAGGTATCGGTAAAACGACCCTCGCTCGACTTATATACAACCAGGAAGAAGTTAAAAATCATTTTGATGTACAAGTCTGGGTTTGTGTGTCTGAAGATTTTGATATGTTGAGAGTAACCAAATCTCTCCTTGAAGTTGTCACTTCAAGAGAATGGAATACCAATAACCTTGATCTTCTTCGAGTTGAATTGAAGAAAAATTTGAACAACAAAAGATTTTTGATTGTATTGGATGATGTTTGGAATGAAAACGGTTGTGATTGGGATGAGCTGATATGTCCTTTTTTTGGAAAATCGGGAAGCAAGGTAATCATTACAACACGTGAACAGAGAGTTGCAGAGGCTGTACGTGCATTTCACATTCATAAATTAGCACATCTATCGGACGAAGACTCTTGGCATTTACTCTCAAAGTGTGCATTTAGAAGTGAGAATTTTCATGGTGATGAATATCCAACCCTTGAAGAAATTGGTCGGAGGATTGCAATGAAGTGCGGTGGACTTCCACTGGCTGCTAGAGCACTTGGAGGACTTCTACGTGATACCGTAGATGCAGAGAAGTGGAATGCAATTCTGAATAGTGACATATGGAACTTATCAAATGATAAAGTCATGCCTGCATTGCATTTGAGTTATCAAGATCTTCCTTGTCACTTGAAAAGATGTTTCGCCTATTGTTCAATTTTTCCAAAGGATTATCAACTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGATTCATTGAGCATTATCTAGGTCCAAAAGAAGCAGAGGAAATAGGTAACGAGTTCTTTGCTGAATTGATATCTAGATCCTTAATTCAACAAGCATATGATGATACTGATGGAGAAAAATTTGTCATGCATGACCGTATCAGTGACTTAGCGGCATTCGTATCAGGAACAAGTTGTTGTTGCCTTAAATATGGAGGTAAAATCTCTAGAAATGTTCGTTATTTATCATATAACCGTGAAAAGCATGACATTTCTAGCAAGTGTGAGATTTTCCACGATTTCAAAGTCTTGCGAAGCTTCCTGCCGATTGGCCCCTTGTGGGGACAAAATTGCTTACCTAGACAGGTGGTTGTTGATTTATTACCCACTCTCATTAGACTGCGTGTGTTATCGCTATCAAAGTATAGAAATGTCACCAAGCTACCGGATTCACTTGACACTTTGACGCAATTGAGGTATCTAGATCTTTCCAACACAAGAATCAAAAGTTTGCCTAGCACAATATGTAACCTATACAATTTGCAAACCTTGATTTTATCATATTGTTATCGTCTCACTGATTTGCCAACACATATTGGAATGTTGATCAATTTACGTCACCTTGATATTAGTGGGACAAATATAAAAGAGTTGCCAATGCAAATTGTCGAACTAGAAGAACTTCGAACTCTAACTGTTTTTATAGTGGGTAAGGGTCAAATCGGGTTAAGTATCAAAGAGCTCAGGAAATATCCACGTCTACAGGGAAAACTTACCATCTTGAACCTGCATAATGTCACTGATTCCATGGAGGCATTTTCTGCCAACTTAAAAAGCAAAGAGCAAATTGAGGAGTTAGTATTACAATGGGGAGAACAAACTGAAGACCATCGAACTGAGAAAACTGTGCTTGATATGTTGCGACCATCAATAAACTTGAAGAAACTGAGTATTGGCTACTATGGCGGAAAAAGCTTTCCAAGTTGGTTGGGAGATTCTTCATTCTTTAACATGGTGTACCTTAGCATCAGTAATTGTGAATATTGCCTTACACTTCCATCACTAGGGCATCTATCTTCTCTCAAGGACCTAAGGTTAGATGGTATGAGGATGTTGAAGACTATTGGCCCAGAGTTCTATGGCATGGTAGGAGAAGGTTCCAATTCTTCATTCGAACCGTTTCCTTCCCTACAAAATCTGCAATTTAGGAACATGTCAAGTTGGAAGGAATGGCTTCCCTTTGAAGGAGGCAAACTTCCTTTTCCTTGTCTCCAAACTCTGAGGTTACAGAAGTGTTCTGAACTGAGAGGACATTTGCCCAACCATCTTCCTTCCATACAACAAATTATAATAATTGATTGTGGCCGTCTCCTAGAAACTCCGTCCACTCTGCATTGGCTCTCAACAATAGAAAATAAAAATATTGTTTACCTAAAATGA 2733 0.3893 MFATGGAFLSAPILTMMDKLTSTEFQDYVNNMKLNHSLLKQLQTTLLTLEAVLVDAERKQIHDPAVREWLNDLKDAIYDTEDLLNQISYDSIQSKVTNQVLNFLSSLFSNTNGEVNSQIKISCERLQLFAQQKDILGLQTVSWKVLTGPPTTLLVNEYVTVGRKDDKEELVNMLISDTDNNNIGVVAITGMGGIGKTTLARLIYNQEEVKNHFDVQVWVCVSEDFDMLRVTKSLLEVVTSREWNTNNLDLLRVELKKNLNNKRFLIVLDDVWNENGCDWDELICPFFGKSGSKVIITTREQRVAEAVRAFHIHKLAHLSDEDSWHLLSKCAFRSENFHGDEYPTLEEIGRRIAMKCGGLPLAARALGGLLRDTVDAEKWNAILNSDIWNLSNDKVMPALHLSYQDLPCHLKRCFAYCSIFPKDYQLDRKQLVLLWMAEGFIEHYLGPKEAEEIGNEFFAELISRSLIQQAYDDTDGEKFVMHDRISDLAAFVSGTSCCCLKYGGKISRNVRYLSYNREKHDISSKCEIFHDFKVLRSFLPIGPLWGQNCLPRQVVVDLLPTLIRLRVLSLSKYRNVTKLPDSLDTLTQLRYLDLSNTRIKSLPSTICNLYNLQTLILSYCYRLTDLPTHIGMLINLRHLDISGTNIKELPMQIVELEELRTLTVFIVGKGQIGLSIKELRKYPRLQGKLTILNLHNVTDSMEAFSANLKSKEQIEELVLQWGEQTEDHRTEKTVLDMLRPSINLKKLSIGYYGGKSFPSWLGDSSFFNMVYLSISNCEYCLTLPSLGHLSSLKDLRLDGMRMLKTIGPEFYGMVGEGSNSSFEPFPSLQNLQFRNMSSWKEWLPFEGGKLPFPCLQTLRLQKCSELRGHLPNHLPSIQQIIIIDCGRLLETPSTLHWLSTIENKNIVYLK* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2041 910 Pfam Leucine Rich repeats (2 copies) 587 628 IPR025875 -
Mtr7g2041 910 PANTHER - 48 897 - -
Mtr7g2041 910 SMART LRR_typ_2 633 656 IPR003591 -
Mtr7g2041 910 SMART LRR_typ_2 586 609 IPR003591 -
Mtr7g2041 910 PANTHER DISEASE RESISTANCE PROTEIN RP 48 897 IPR044974 GO:0006952
Mtr7g2041 910 Gene3D Ribonuclease Inhibitor 547 909 IPR032675 -
Mtr7g2041 910 Pfam NB-ARC domain 164 403 IPR002182 GO:0043531
Mtr7g2041 910 Gene3D - 13 121 - -
Mtr7g2041 910 ProSiteProfiles Leucine-rich repeat profile. 588 609 IPR001611 GO:0005515
Mtr7g2041 910 Gene3D - 409 490 IPR036388 -
Mtr7g2041 910 SUPERFAMILY L domain-like 480 908 - -
Mtr7g2041 910 Coils Coil 39 59 - -
Mtr7g2041 910 CDD AAA 161 271 - -
Mtr7g2041 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 417 IPR027417 -
Mtr7g2041 910 Gene3D - 317 407 IPR042197 -
Mtr7g2041 910 Gene3D - 151 311 IPR027417 -
Mtr7g2041 910 PRINTS Disease resistance protein signature 185 200 - -
Mtr7g2041 910 PRINTS Disease resistance protein signature 258 272 - -
Mtr7g2041 910 PRINTS Disease resistance protein signature 356 370 - -
Mtr7g2041 910 PRINTS Disease resistance protein signature 584 600 - -
Mtr7g2041 910 Pfam Rx N-terminal domain 18 98 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2041 Mtr-Chr7 36599943 36603738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2041 182 367 WRKY Transcription Factor Family AT5G45050 28.713 2.01e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2041 - - mtr:MTR_3g032370 1079.7