Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2039 ATGGCAACATTCACTATATGTGAAGCATCTTCTTCCTCTCCATGCAGTTCAAGTTCGACCACACGGTTATGCAGCTACCATGTGTTTTTGAGTTTTCGAGGAGAAGATACACGCAAAGGATTCACTGATCATTTACGCGCTGCCCTTGAAAGAAAAGGGATCACAACTTTCAGAGATGACAAAGACCTTGAGAGAGGGAAAAACATTTCAGAAAAGCTAATCAATGCAATAAAAGATTCTATGTTTGCCATCACTATTATCTCACCAGACTATGCATCTTCCACTTGGTGTTTGGATGAGCTTCAAATGATCATGGAGTGCAGCAGCAATAACAACCTGCATGTTTTGCCAGTCTTCTATGGTGTGGATCCGTCTGATGTAAGGCATCAAAGAGGAAGCTTTGAGGAAGCCTTCAGAAAACATCTAGAGAAATTTGGTCAAAACAGTGATAGGGTTGAAAGATGGAGAAATGCAATGAATAAAGTTGCTGGTTACTCTGGATGGGATTCCAAGGGCCAGCATGAGGCATTACTAGTTGAAAGCATTGCTCAACACATACATAGAAAGCTGGTTCCTAAATTGTCATCTTGTACAGAGAACCTTGTTGGGATTGAGTCAAAGGTGGAGGAAGTGAACAAGCTCATAGGTATGGGGTTGAATGACGTTCGCTTTATCGGCATATGGGGTATGGGTGGCATAGGCAAGTCAACTATTGCTAGAGCGGTCTATGAAGCAATCCGATGTGAATTTCAACTTACTTGCTTTCTAGAAAATGTTAGAGAGATATCTGAGACAAATGGTTTAGTTCACTTACAAAGACAACTTCTTTCTCATATGAGTATAAGTAGGAATGATTTTCATAATTTGTATGATGGCAAAAAAACAATACAAAACTCTTTCCGTAGGAAAAAGGTTCTACTTGTTCTTGATGATGTGAATGAATTAAACCAGTTGGAGAATATGGCTGGGAAGCAAGACTGGTTTGGTCCGGGAAGTAGAGTAATAATCACAACGAGAGATAAACACTTGTTAATGACACATGGAGTACATAAAACTTATGAGGTTTGGATGTTATTCCAAAATGAAGCTCTTAATCTCTTTTGTTTGAAAGCCTTTAAAGGAGATAAACCACAAGAAGGCTATTTGGATTTGTCCAAAGAAGTGGTGGACTATACTGGTGGTCTTCCATTGGCACTTGAGGTGTTTGGTTCCTATCTTTATGGAAGAAATGTTGATCTTTGGCATAGTGCCATTAAAAAAATAAGAAGTGTGCCTCTACGTAAAATCCAAGATAAACTGGAAATAAGTTATGAGAGCTTAGATCCAATGGAGAAGGATGTATTTCTTGATATTGCGTGTTTCTTCAAGGGAATGAAGATAGATAAAGTAATAGATATATTAGAAAATTGTGGTTATTTCCCCAAAATTATAATTCAAGTTTTGATTGACAGATCTTTGATAACTCTAGATCGGGTCAATAATAAATTGGGGATGCATGATTTGCTTCAAGAAATGGGCAGGAATATTGTATTTCAGGAATCTCCAAATGATCCTGGCAGATGTAGCAGGTTATGGTCTAAAGAGGACATCGATTCTGTGTTGACAAAAAATAAGGGAACTGAAAAAATTAGCAGTGTAGTTCTGAACTTACTTCAACCATATGAAGCACGCTGGAGCACTGAAGCATTCTCAAAAACAAGTCAGCTAAAATTGCTCAACTTAAATGAGGTGCAACTTCCCCTTGGCCTCAGCTGCCTTCCTTGTTCGCTGAAAGTTCTTCGGTGGAGAGGATGTCCTCTTAAGACTCTAGCGCAAACAAATCAGCTGGATGAAGTTGTTGACATTAAATTATCTCATAGCAAAATCGAAAAACTTTGGCACGGAGTATATTTTATGGAAAAGCTGAAGTATCTGAATTTGAAATTTTCCAAGAACCTAAAGAGATTGCCAGATTTTTCCGGGGTTCCAAATCTTGAAAAATTGATTCTTAAAGGCTGCTCAATCCTAACTGAGGTTCATCTATCCCTTGTACACCACAAGAAAGTTGTTGTAGTGAGTTTAAAAAACTGCAAAAGTCTAAAATCGCTTCCCGGGAAGTTGGAGATGAGTTCCCTGAAGAAGTTAATTCTGTCAGGCTGCAGTGAATTTAAATTCCTTCCAGAGTTTGGGGAAAAAATGGAAAATTTATCAATCCTTGCTTTAAAAGGAACAGATATAAGAAAACTGCCCTTATCACTTGGAAGCCTAGTTGGACTTACTAATTTGAACTTAAAGGACTGCAAAAGTCTTGTTTGCCTTCCGGATACCATTCATGGATTGAATTCCCTCATAATTTTGAACATTTCTGGATGTTCAAGACTTTGTAGATTGCCAGATGGATTAAAGGAAATACAGTGTTTGAAGGAACTTCATGCCAATGATACTGCTATTGATGAACTACCTTCCTTCATTTTCTATCTAGATAATCTTAAAGTATTATCATTTGCTGGTTGCCAAGGGCCACCGGCAATGTCAACGAACTGGTTTCCCTTCAATTGGATGTTTGGGGGTCAATCAGCTTCCACTGGATTCAGATTACCAACTTCTTTCCTGAGCTTACATTCTTTGAAATATTTAAACCTAAGTTATTGTAATCTTTCTGAAGAATCGATCCCGAATTATTTTCACCACCTATCATCTTTGAAGTCTTTGGATCTAACTGGTAACAATTTTGTTATCATACCAAGCAGCATTTCTAAACTTTCAAGACTGAGATTTCTTTGTCTAAATTGGTGCGAACAGCTTCAATTGTTGCCAGAGCTTCCATCAAGAATAATGCAATTGGATGCAAGCAATTGTGATTCATTGGAAACTCGTAAATTTGATCCAATAGAGAGCTTTATGAAGGGACGCTGTCTACCCGCGACCAGATTTGACATGCTTATCCCATTCCCAGGGGATGAAATTCCATCTTGGTGTGTTTCTCAAGGATCTGTTTCCTGGGCTAAAGTACATATCCCTAATAATTTGCCGCAAGATGAATGGGTAGGATTTGCATTGTGTTTCCAGCTAGTGAGTTATACCTTCCCACCTGAACTGTGCAATCATGAGATTGATTGTTATTTGTTTTCACCTAATGGTAAGCAGCTGATCTTGATCAGCACCAGGAGATTACCTCCTATGGATCCATGTTATCCTCACCTTTATATTCTCTACTTGTCCATTGAACAATTCCGCGACAAGATTCTCCAAGATGATTATTGGGATGGCGTTGAATTTTCATTGAAATGTTATTGTTGCCATTCATTGCGAATATTCAGTAGTGGCTGCCGTTTGGTGTGCAAACAAGTTGTTGAAGTGTTTCAAGATCAAACAGTCGTCAGTCCTTGA 3369 0.3844 MATFTICEASSSSPCSSSSTTRLCSYHVFLSFRGEDTRKGFTDHLRAALERKGITTFRDDKDLERGKNISEKLINAIKDSMFAITIISPDYASSTWCLDELQMIMECSSNNNLHVLPVFYGVDPSDVRHQRGSFEEAFRKHLEKFGQNSDRVERWRNAMNKVAGYSGWDSKGQHEALLVESIAQHIHRKLVPKLSSCTENLVGIESKVEEVNKLIGMGLNDVRFIGIWGMGGIGKSTIARAVYEAIRCEFQLTCFLENVREISETNGLVHLQRQLLSHMSISRNDFHNLYDGKKTIQNSFRRKKVLLVLDDVNELNQLENMAGKQDWFGPGSRVIITTRDKHLLMTHGVHKTYEVWMLFQNEALNLFCLKAFKGDKPQEGYLDLSKEVVDYTGGLPLALEVFGSYLYGRNVDLWHSAIKKIRSVPLRKIQDKLEISYESLDPMEKDVFLDIACFFKGMKIDKVIDILENCGYFPKIIIQVLIDRSLITLDRVNNKLGMHDLLQEMGRNIVFQESPNDPGRCSRLWSKEDIDSVLTKNKGTEKISSVVLNLLQPYEARWSTEAFSKTSQLKLLNLNEVQLPLGLSCLPCSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSHSKIEKLWHGVYFMEKLKYLNLKFSKNLKRLPDFSGVPNLEKLILKGCSILTEVHLSLVHHKKVVVVSLKNCKSLKSLPGKLEMSSLKKLILSGCSEFKFLPEFGEKMENLSILALKGTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLNSLIILNISGCSRLCRLPDGLKEIQCLKELHANDTAIDELPSFIFYLDNLKVLSFAGCQGPPAMSTNWFPFNWMFGGQSASTGFRLPTSFLSLHSLKYLNLSYCNLSEESIPNYFHHLSSLKSLDLTGNNFVIIPSSISKLSRLRFLCLNWCEQLQLLPELPSRIMQLDASNCDSLETRKFDPIESFMKGRCLPATRFDMLIPFPGDEIPSWCVSQGSVSWAKVHIPNNLPQDEWVGFALCFQLVSYTFPPELCNHEIDCYLFSPNGKQLILISTRRLPPMDPCYPHLYILYLSIEQFRDKILQDDYWDGVEFSLKCYCCHSLRIFSSGCRLVCKQVVEVFQDQTVVSP* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2039 1122 Gene3D - 189 353 IPR027417 -
Mtr7g2039 1122 Gene3D Ribonuclease Inhibitor 845 962 IPR032675 -
Mtr7g2039 1122 Gene3D Ribonuclease Inhibitor 700 840 IPR032675 -
Mtr7g2039 1122 Gene3D Ribonuclease Inhibitor 557 699 IPR032675 -
Mtr7g2039 1122 SMART till_3 25 165 IPR000157 GO:0007165
Mtr7g2039 1122 PRINTS Disease resistance protein signature 224 239 - -
Mtr7g2039 1122 PRINTS Disease resistance protein signature 299 313 - -
Mtr7g2039 1122 PRINTS Disease resistance protein signature 392 406 - -
Mtr7g2039 1122 PRINTS Disease resistance protein signature 889 905 - -
Mtr7g2039 1122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 451 IPR027417 -
Mtr7g2039 1122 ProSiteProfiles TIR domain profile. 24 190 IPR000157 GO:0007165
Mtr7g2039 1122 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 168 IPR035897 -
Mtr7g2039 1122 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 716 IPR044974 GO:0006952
Mtr7g2039 1122 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 719 952 IPR044974 GO:0006952
Mtr7g2039 1122 SUPERFAMILY L domain-like 511 831 - -
Mtr7g2039 1122 Pfam C-JID domain 977 1109 IPR045344 -
Mtr7g2039 1122 PANTHER TMV RESISTANCE PROTEIN N-LIKE 719 952 - -
Mtr7g2039 1122 PANTHER TMV RESISTANCE PROTEIN N-LIKE 32 716 - -
Mtr7g2039 1122 Gene3D - 358 441 IPR042197 -
Mtr7g2039 1122 SMART LRR_typ_2 866 890 IPR003591 -
Mtr7g2039 1122 SMART LRR_typ_2 726 749 IPR003591 -
Mtr7g2039 1122 SMART LRR_typ_2 891 914 IPR003591 -
Mtr7g2039 1122 Gene3D - 18 188 IPR035897 -
Mtr7g2039 1122 SUPERFAMILY L domain-like 859 949 - -
Mtr7g2039 1122 Pfam TIR domain 26 203 IPR000157 GO:0007165
Mtr7g2039 1122 SUPERFAMILY "Winged helix" DNA-binding domain 428 534 IPR036390 -
Mtr7g2039 1122 Pfam NB-ARC domain 207 441 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2039 Mtr-Chr7 36580826 36585521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2039 26 843 WRKY Transcription Factor Family AT4G12020 30.178 2.88e-101 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2039 - - gmx:100815486 1413.67