Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2019 ATGGGATTCCCCGTAGGGTACCCTGAAGTCTCCGTCCCTAACATCTTTCTCTACACTCTCTCTCTCCTCTCCTTCCTCCGTTCTCTCACCATCTCCTTCCTCTCTCTCCTCCATCTCTCCGACCTCCTCGACACCGACTTCTCCACCACCACCCTACCTGACTCCCACATCCACCGTCCCACTCTCTCTGCAATCCTCATCCGTCAGTTTCTCCCAATCATCACTTTCAATGACCTCGCCGAAGGAGATTCTTCACCGCCGGTGGGTTGTGCTGTGTGTTTAAACGAATTCGCCGGAGAAGAAGAGATCAGATGTATGGCGAACTGTAGACATATGTTTCATCGGACGTGTGTGGACCGTTGGATTGATCATGATCAGAAAACATGTCCACTTTGTAGGACCCATTTTGTGCCTTATCATAAAATGGAAGATTATAATCAACGGTTATGGAATGATGCTGCTTCTGAAGATGATATTGATGACGATGTTTCTCTTTTTTCTCATCGTCATGATTATTATTACATTGCTAATGCTTCATTATGA 543 0.4622 MGFPVGYPEVSVPNIFLYTLSLLSFLRSLTISFLSLLHLSDLLDTDFSTTTLPDSHIHRPTLSAILIRQFLPIITFNDLAEGDSSPPVGCAVCLNEFAGEEEIRCMANCRHMFHRTCVDRWIDHDQKTCPLCRTHFVPYHKMEDYNQRLWNDAASEDDIDDDVSLFSHRHDYYYIANASL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2019 180 SMART ring_2 90 132 IPR001841 -
Mtr7g2019 180 ProSiteProfiles Zinc finger RING-type profile. 90 133 IPR001841 -
Mtr7g2019 180 Pfam Ring finger domain 90 133 IPR001841 -
Mtr7g2019 180 SUPERFAMILY RING/U-box 67 144 - -
Mtr7g2019 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 138 IPR013083 -
Mtr7g2019 180 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 174 - -
Mtr7g2019 180 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2019 Mtr-Chr7 36311948 36312892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2019 1 155 C3H Transcription Factor Family AT1G63840 43.038 7.36e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2019 K16281 K16282 gmx:100813224 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2019 7 36311948 36312892 Mtr8g0909 8 11185191 11185928 PCT