Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2014 ATGTTGGGTAGTGAGCAAACTTTGGATTTGTATAAGCTGTTCATGGTGGTGAAGGACAAAGGTGGTTATGATGTTGTTTGTAAGAATGAGTTGTGGGATTTGGTTGGGGAAGAATATGGGTTGGGTGTGAAAGTTGGTTCTTCGGTTAAACTTGTTTATAGTAAGTATTTGAGTGGTTTAGAGACGCCTTTGAAGAATGTCGTTGATGGTGAGTTCCCGAAGCGTGATTTAGTGGGCGATAGAGTTAAGTTTGGGGAGCGTTTAACGGAGTTGCAGGCGGAGTTGGTGTTGGATGATTATGGTGAGGGAGATGTCGGGGATGAAGTCAAGAGTGTATACGGATGTAGGAAGAAGTTGTGTGATACTAATAGAGTGAAGGTTGTGAATCCAGAGTTGAATGCGTCTGAACTCGAAAAGGTATATGAGTATATAGATGGGAGGAAGTCGTGTGGTACTAATAAAATGAAGGACACGAATCTTGTGTCTAATATGGCCAAGAAAGTTGAGAGTGAAGGACTAGTTGACGTGCTTATGCAGGATTGTAAGACGAATGAGACTAGTCTCAGAAAGTTGGTTAACCAAAATGCTGCAATGGAAATAATGGATGATGTATCCGATGTAGCAAACAGCATGCCTGGATTGTCAGATGGAAGCAAGAGTTGTGCTAATGATGACGCCAATGACAGTGGCGATGATGTCTTGATGTTGGACCCATCTAGTGTTAATAGAGAGAGCTTTGGTCGTAAAAGGAAGAGAGACGACTTGATGTCAGAAATGCAAAGTTGGGTTATTAGAACTGCAAAGAATCCTTGTGATCCTGTGTTAGGTTCAATGCCTGAAAAGTCAAAGTGGAAGTCTTACGGTAATCAAGAGATCTGGAAGAAGGTTTTGTTGTTTCGAGAAGCTGCCTTTTTGAAAAAAGATTTTGGATCAGACTGCGAAAAACTCAGCTGGCTGGCTCAGAGGATGCATCCTTCCATGTATGATGTTAACCTTGGGGTAAATTACAATCTTAGACAACGGATCAAACGTGACAATGGAGTTTTAGTTGGAAAATCTGCATCTATCTTGCAAAGAACACCTGATTCCGAAGCTAAGGAAAAGTTACTCGACTCCTGTGTTCCAGAATCAATTCTTGATGCACCTCCCACAGTGAATATCCCTCTCGGGCCAAACCATCAAGCTGAAGTGCCCGAATGGACTGGCACAACTCATAAGAGTGATTCTAAGTGGCTGGGAACTCAAATATGGCCACTACAAATTGTAAAATCCAAACTTTTGGAAGGGGAACCTGTCGGAAAGGGAAGACAAGATTCATGCCGTTGCCAAGTACAGGGTTCTGTCGAGTGTGTTCGATTTCACATTGCTGAGAAAAGCGCTAAACTCAAGCTGGAAATAGGTGTGGCCTTTTACCAGTGGAATTTAGACAAAGCAGGGGAAGAAGTGAGGCGATGCTGGACGGCTGAAGAAGAGAAAAAGTTCAAAGATGTAGTGAAATCGAACCCTGCTTCGCTTGATAGATGTTTCTGGGACGATATTTTCACAACATTTCCTAAGAAGAGCAGGGAAAGTTTAGTCAGCTACTACTTCAATGTCTTTCTTTTGCAGCGCAGAGGATACCAGAACAGGCATACTCCTGATAACATTGACAGTGATGATGAAGAATCGGAATTTACACCATTGAAGGGTTCTTTTGGACATCAAACTGACAAATCAAACAGCTTCACCTTATTATCCCCTAAGAAGCCACAGCCAACGCCACATACAAAAGGAAGACAGCTAGTGAATGGCCTCAAATCATGA 1803 0.4248 MLGSEQTLDLYKLFMVVKDKGGYDVVCKNELWDLVGEEYGLGVKVGSSVKLVYSKYLSGLETPLKNVVDGEFPKRDLVGDRVKFGERLTELQAELVLDDYGEGDVGDEVKSVYGCRKKLCDTNRVKVVNPELNASELEKVYEYIDGRKSCGTNKMKDTNLVSNMAKKVESEGLVDVLMQDCKTNETSLRKLVNQNAAMEIMDDVSDVANSMPGLSDGSKSCANDDANDSGDDVLMLDPSSVNRESFGRKRKRDDLMSEMQSWVIRTAKNPCDPVLGSMPEKSKWKSYGNQEIWKKVLLFREAAFLKKDFGSDCEKLSWLAQRMHPSMYDVNLGVNYNLRQRIKRDNGVLVGKSASILQRTPDSEAKEKLLDSCVPESILDAPPTVNIPLGPNHQAEVPEWTGTTHKSDSKWLGTQIWPLQIVKSKLLEGEPVGKGRQDSCRCQVQGSVECVRFHIAEKSAKLKLEIGVAFYQWNLDKAGEEVRRCWTAEEEKKFKDVVKSNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNRHTPDNIDSDDEESEFTPLKGSFGHQTDKSNSFTLLSPKKPQPTPHTKGRQLVNGLKS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2014 600 Pfam Myb-like DNA-binding domain 483 532 IPR001005 -
Mtr7g2014 600 Pfam ARID/BRIGHT DNA binding domain 5 59 IPR001606 GO:0003677
Mtr7g2014 600 CDD ARID 6 61 - -
Mtr7g2014 600 SMART bright_3 2 66 IPR001606 GO:0003677
Mtr7g2014 600 SUPERFAMILY ARID-like 6 69 IPR036431 GO:0003677
Mtr7g2014 600 MobiDBLite consensus disorder prediction 544 560 - -
Mtr7g2014 600 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Mtr7g2014 600 MobiDBLite consensus disorder prediction 212 238 - -
Mtr7g2014 600 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 585 - -
Mtr7g2014 600 SMART ELM2_2 387 437 IPR000949 -
Mtr7g2014 600 MobiDBLite consensus disorder prediction 562 583 - -
Mtr7g2014 600 MobiDBLite consensus disorder prediction 544 600 - -
Mtr7g2014 600 CDD SANT 486 533 IPR001005 -
Mtr7g2014 600 Gene3D - 2 70 IPR036431 GO:0003677
Mtr7g2014 600 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2014 Mtr-Chr7 36253480 36259242 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mtr7g2014 ARID 2.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2014 - - mtr:MTR_7g078120 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2014 7 36253480 36259242 Mtr8g0921 8 11288938 11292736 PCT