Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1998 ATGTTTGAACGATTGAATAGTTTTGAATCTATTATAATGGCTGTGGTGAGTTCTATGCCTGCAACAATACAAAGAACAGGTTCTGTGAGTTCGGTTCGCGATGTTCGGGGAGAAATTGAAGAGGAACCTAATCAAATTGTGGTTGATGAGGTAATCTGTGTTGCTGTGTCAAAGGATGTAAAAGAGAGTAAATTGAATTTGATTTGGGCAATACAGAATTCTGGTGGAAAAAAGATCTGTATCCTCTTTGTTCATGTGCCTGCAACAATGATCCCTTTGATGGGTGCTAAATTTCCCGCAAGTTCATTGAAGGATCAAGAAGTCCGAGCTTACCGGGAAATGGAAAGGCAAAACGTGCATAAGACTCTTGATGAATATCTTCGAATCTGTCAACGGATGGGGGTGCGAGCAGAGAAATTGCATATCGAAATGGAGAATATTGAAAAAGGAATAATAGAACTTATATCTCAGCATGGAATCCGAAAGCTTATTATGGGAGCAGCATCAGATAAGAATTATTCTAGGAGAATGATGGACCTCAGATCTAGGAAAGCCATCTACGTATGTGAACAAGCTCCATCTTCTTGCCATATACAGTTTATCTGCAAAGGCCACCTTATACACACAAGGGATCGCAGTTTAGATGAACGAAACGTAGAGGTTGCATCTCCTTTGCTGCAGCAAGGGCCTAACTCTGTGAGACCTTCAAGATCTCAATCTATTACACTGGGGCAAAATCATAGGACAAATTCAATAAGTTCTTCTCAAGAGTTATTTCGTAGAGTGAGGTCTGCCAATGATGGAATGACAGCCAGCATTACAACTAATTCTTCTCCAGTTGACAATGAGGGGTTTTCAACTCCACGTAACAGGCGAGGTACAGAAGTAAGTTCTGATGAGTCCGATAGGTTGTCAAGGACGAGTCCTTCAGGTTTGTCAACTTTCTCTGATAGTACAATTGATCCAACACTGACGCCATATTCTGTTGCCGAGAGCTGTGAGAATGCATCAGACTTGACTTTGAGTCACCTGATTAAAGACGAGGATCTTCGTCATTTATCGCCTCCAAGTGTACTGCAGGATGGTGGAGTGAATGATACGCTCTATGACCAACTTGAACAAGCTATGTCGGAGGCTAATAATGCTACTCGACACGCATACCAAGAAACTTTTAGACGCGGGAAAGCTGAAAAAGATGCCATTGAAGCCATACGCAGGGCTAAAGCATCTGAAAGCTTATATACAGATGAATTGAATCTGAGGAAAATGGCCGAGGAAGAACTAAGAAAGGAAAAAGAAGAACTTGAGAGTGTGACGAGCCAGAGAGACAAAGTAAATGAAGAACTTCGACTTGCTGTGGATCTGAAGTCATCACTAGAGAGTCAACTTGCATCGTCTGAAGTTATGATACAGGAGTTGGAGCAGAAGATCATATCTGCTGTTGAGCTGTTACAAAGCTACAAGAACGAGAGAGATGAATTGCAGATCCAGCGTGATAATGCATTGAGAGAGGCTGAAGATCTGAGGAAAAAACAAGGAGAAGGCTCAAGCACTCATGTGCCTCAATTGTTCTCAGAATTCTCTTTTTCAGAAATCGAAGAAGCAACAAGTAACTTTAATCCATCTCTAAAGATCGGAGAAGGTGGATATGGAAATATATATAAAGGTCTACTCCGTCACACCGAAGTGGCTATAAAAATTTTGCATGCCAACAGCATGCAAGGACCCTTGGAGTTTCAGCAGGAGGTCGACGTATTGAGTAAGCTAAGGCATCCCAATCTGATCACTCTTATAGGAGCCTGTCCGGAATCCTGGTCTCTTGTCTATGAGTATTTGCCAAATGGAAGCCTTGAAGACCGTCTTGCCTGCAAGGATAACACGCATCCATTATCATGGCAAACACGGATTCGAATCGCTGCAGAACTCTGCTCCGCTCTCATCTTTCTTCATTCAAGTAAACCTCACAGCATAGTGCATGGTGATTTGAAACCCTCCAATATCATTCTGGATGGAAACCTTGTCAGTAAGCTTAGCGATTTTGGAATCTGTCGCGTATTATCAAATTACGAGAATTCTAGTAATAATAATACACAGTTTTGGAAAACCGATCCAAAGGGAACTTTTGTCTACATGGATCCTGAATTCCTTGCTTCCGGTGAACTCACTCCGAAATCAGATGTTTATTCTTTTGGAATCATATTATTGAGATTGTTGACTGGGAGACCGGCATTGGGAATAACTAAGGAGGTGAAATATGCAGTAGATACCGGAAAGTTGACATCTTTATTGGATCCTTTGGCCGGAGACTGGCCATTTGTGCAGGCTGAACAGTTAGCTCGCTTGGCCTTGCGGTGTTGTGAGATGAATAGGAAGAGTCGGCCGGACCTTCATTCAGATGTATGGAGGATATTGGATGCAATGAGGGCTTCTTCTGGTGGTACAAACTCCTTTGGTCTAAGTTCTGAAGGGCCACATCAACCTCCTTCATATTTTATTTGTCCAATCTTCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTTTACTTACGAAGCAGAGGCTATCCGAGGATGGCTTGACAGTGGTCATGACGCTTCACCGATGACAAATAGTACGCTTTCACATCAGAATCTTGTCCCCAACCGCGCTCTTCGCTCTGCAATTCAGGATTGGCTTCAAAGTCACTGA 2694 0.4269 MFERLNSFESIIMAVVSSMPATIQRTGSVSSVRDVRGEIEEEPNQIVVDEVICVAVSKDVKESKLNLIWAIQNSGGKKICILFVHVPATMIPLMGAKFPASSLKDQEVRAYREMERQNVHKTLDEYLRICQRMGVRAEKLHIEMENIEKGIIELISQHGIRKLIMGAASDKNYSRRMMDLRSRKAIYVCEQAPSSCHIQFICKGHLIHTRDRSLDERNVEVASPLLQQGPNSVRPSRSQSITLGQNHRTNSISSSQELFRRVRSANDGMTASITTNSSPVDNEGFSTPRNRRGTEVSSDESDRLSRTSPSGLSTFSDSTIDPTLTPYSVAESCENASDLTLSHLIKDEDLRHLSPPSVLQDGGVNDTLYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKASESLYTDELNLRKMAEEELRKEKEELESVTSQRDKVNEELRLAVDLKSSLESQLASSEVMIQELEQKIISAVELLQSYKNERDELQIQRDNALREAEDLRKKQGEGSSTHVPQLFSEFSFSEIEEATSNFNPSLKIGEGGYGNIYKGLLRHTEVAIKILHANSMQGPLEFQQEVDVLSKLRHPNLITLIGACPESWSLVYEYLPNGSLEDRLACKDNTHPLSWQTRIRIAAELCSALIFLHSSKPHSIVHGDLKPSNIILDGNLVSKLSDFGICRVLSNYENSSNNNTQFWKTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYAVDTGKLTSLLDPLAGDWPFVQAEQLARLALRCCEMNRKSRPDLHSDVWRILDAMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDASPMTNSTLSHQNLVPNRALRSAIQDWLQSH* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1998 897 Coils Coil 365 389 - -
Mtr7g1998 897 SMART Ubox_2 830 893 IPR003613 GO:0004842|GO:0016567
Mtr7g1998 897 PANTHER U-BOX KINASE FAMILY PROTEIN 31 896 - -
Mtr7g1998 897 SUPERFAMILY Protein kinase-like (PK-like) 514 797 IPR011009 -
Mtr7g1998 897 CDD STK_N 51 204 - -
Mtr7g1998 897 ProSiteProfiles U-box domain profile. 826 897 IPR003613 GO:0004842|GO:0016567
Mtr7g1998 897 Gene3D Transferase(Phosphotransferase) domain 1 612 816 - -
Mtr7g1998 897 MobiDBLite consensus disorder prediction 269 319 - -
Mtr7g1998 897 SMART serkin_6 539 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1998 897 SUPERFAMILY RING/U-box 821 896 - -
Mtr7g1998 897 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 825 897 IPR013083 -
Mtr7g1998 897 ProSiteProfiles Protein kinase domain profile. 539 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1998 897 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 61 177 - -
Mtr7g1998 897 Coils Coil 414 448 - -
Mtr7g1998 897 MobiDBLite consensus disorder prediction 269 292 - -
Mtr7g1998 897 Gene3D Phosphorylase Kinase; domain 1 524 611 - -
Mtr7g1998 897 MobiDBLite consensus disorder prediction 303 319 - -
Mtr7g1998 897 Pfam U-box domain 828 897 IPR003613 GO:0004842|GO:0016567
Mtr7g1998 897 Coils Coil 456 511 - -
Mtr7g1998 897 MobiDBLite consensus disorder prediction 223 255 - -
Mtr7g1998 897 ProSitePatterns Protein kinases ATP-binding region signature. 545 566 IPR017441 GO:0005524
Mtr7g1998 897 Gene3D HUPs 41 178 IPR014729 -
Mtr7g1998 897 Pfam Protein kinase domain 543 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1998 897 PANTHER OS02G0152300 PROTEIN 31 896 - -
Mtr7g1998 897 MobiDBLite consensus disorder prediction 224 255 - -
Mtr7g1998 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Mtr7g1998 897 CDD RING-Ubox_WDSUB1_like 831 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1998 Mtr-Chr7 36079736 36085941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1998 13 897 U-box Gene Family AT2G45910 55.045 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr7g1998 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1998 - - gmx:100807515 1384.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1998 7 36079736 36085941 Mtr7g1998 7 36079736 36085941 ECH
Mtr8g0929 8 11428654 11437022 Mtr7g1998 7 36079736 36085941 ECH
Mtr7g1998 7 36079736 36085941 Mtr8g0929 8 11428654 11437022 PCT